RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PGM2Q96G03 612 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 ZNF408Q9H9D4 720 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 COL11A1P12107 1806 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 TOM1L1O75674 476 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 TTC4O95801 387 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 ITIH2P19823 946 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 CDO1Q16878 200 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 EMC10Q5UCC4 262 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 FAM160B1Q5W0V3 765 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 SULF1Q8IWU6 871 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 CCDC33Q8N5R6 958 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 UBA3Q8TBC4 463 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 ATXN2LQ8WWM7 1075 aaKnown RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 C12orf42Q96LP6 360 aa18.87■□□□□ 0.61
MCF2L-221ENST00000469415 ASCC2Q9H1I8 757 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 AVENQ9NQS1 362 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-221ENST00000469415 CD48P09326 243 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 SLC1A1P43005 524 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 TMEM62Q0P6H9 643 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 EFCAB12Q6NXP0 572 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 ITGBL1O95965 494 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-221ENST00000469415 AGTP01019 485 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-221ENST00000469415 TXNP10599 105 aaKnown RBP18.86■□□□□ 0.61
MCF2L-221ENST00000469415 PSMA2P25787 234 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 RAB6CQ53S08 254 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 ZBTB8OSQ8IWT0 167 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 WDTC1Q8N5D0 677 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 TMEM174Q8WUU8 243 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 HSPH1Q92598 858 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 RAB6CQ9H0N0 254 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 RNPEPQ9H4A4 650 aa18.86■□□□□ 0.61
MCF2L-221ENST00000469415 CNOT10Q9H9A5 744 aaKnown RBP18.86■□□□□ 0.61
MCF2L-221ENST00000469415 ASS1P00966 412 aaKnown RBP18.85■□□□□ 0.61
MCF2L-221ENST00000469415 VTNP04004 478 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 IQCF3P0C7M6 154 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 NEDD9Q14511 834 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 TCEAL1Q15170 157 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 BRSK2Q8IWQ3 736 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 C4orf33Q8N1A6 199 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 CCDC197Q8NCU1 140 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 CHST13Q8NET6 341 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 TRIM11Q96F44 468 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 RUNDC3BQ96NL0 473 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 TRAIPQ9BWF2 469 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 NFICP08651 508 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 MYBL1P10243 752 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 CYP2C8P10632 490 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 MMP8P22894 467 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 ACTN3Q08043 901 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-221ENST00000469415 PTP4A2Q12974 167 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 CNGA2Q16280 664 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 PLEKHA7Q6IQ23 1121 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 KCNV1Q6PIU1 500 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 FAM81BQ96LP2 452 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 ACO2Q99798 780 aaKnown RBP18.85■□□□□ 0.61
MCF2L-221ENST00000469415 SAMD15Q9P1V8 674 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 WHRNQ9P202 907 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 NAALADL1Q9UQQ1 740 aa18.85■□□□□ 0.61
MCF2L-221ENST00000469415 POLR2AP24928 1970 aaKnown RBP18.85■□□□□ 0.61
MCF2L-221ENST00000469415 MAFO75444 373 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 TBXAS1P24557 533 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 METTL7BQ6UX53 244 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 ZNF677Q86XU0 584 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 ZBED8Q8IZ13 594 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 TMEM35BQ8NCS4 154 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 DNERQ8NFT8 737 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 TWNKQ96RR1 684 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 CALN1Q9BXU9 219 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 NIF3L1Q9GZT8 377 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 SMYD3Q9H7B4 428 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 EFCC1Q9HA90 598 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 GINM1Q9NU53 330 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 ADGRA2Q96PE1 1338 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 ATG7O95352 703 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 ITGB3P05106 788 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 PECAM1P16284 738 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 CETN2P41208 172 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 PSMC1P62191 440 aaKnown RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 PTK6Q13882 451 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 ATF7IP2Q5U623 682 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 GRK7Q8WTQ7 553 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 KLF6Q99612 283 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 CD248Q9HCU0 757 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 CYTH4Q9UIA0 394 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 STYXL1Q9Y6J8 313 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 SCINQ9Y6U3 715 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 TNS1Q9HBL0 1735 aaKnown RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 TMEM191CA6NGB0 347 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 OGTO15294 1046 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 KLF1Q13351 362 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 TARBP2Q15633 366 aaKnown RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 PTPN20Q4JDL3 420 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 SH3PXD2AQ5TCZ1 1133 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 TAOK1Q7L7X3 1001 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 CCDC89Q8N998 374 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 C12orf50Q8NA57 414 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 DCPSQ96C86 337 aaKnown RBP18.84■□□□□ 0.61
MCF2L-221ENST00000469415 ABCF3Q9NUQ8 709 aa18.84■□□□□ 0.61
MCF2L-221ENST00000469415 IP6K2Q9UHH9 426 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms