RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 MGAT1P26572 445 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 PPM1AP35813 382 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 PRIM2P49643 509 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 BLOC1S1P78537 153 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 CCDC38Q502W7 563 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 DGKKQ5KSL6 1271 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 CREB3L3Q68CJ9 461 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 FAAH2Q6GMR7 532 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 RETSATQ6NUM9 610 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 DRICH1Q6PGQ1 229 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-205ENST00000469043 CYP26C1Q6V0L0 522 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 SPATA31D4Q6ZUB0 917 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 EFHBQ8N7U6 833 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 LMBR1Q8WVP7 490 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 TMEM60Q9H2L4 133 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 ZMAT4Q9H898 229 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 CCM2LQ9NUG4 571 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-205ENST00000469043 BLOC1S4Q9NUP1 217 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCFD1-205ENST00000469043 PDP2Q9P2J9 529 aa5.37□□□□□ -1.55
SCFD1-205ENST00000469043 NOC2LQ9Y3T9 749 aaKnown RBP5.37□□□□□ -1.55
SCFD1-205ENST00000469043 BICDL2A1A5D9 508 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 LEFTY2O00292 366 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 GOLIM4O00461 696 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 SEC24DO94855 1032 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 RPN1P04843 607 aaKnown RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 CDK4P11802 303 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 ZNF37AP17032 561 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 TNFSF4P23510 183 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 PEX2P28328 305 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 PIK3CBP42338 1070 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 CLK3P49761 638 aaKnown RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 ADKP55263 362 aaKnown RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 RNASE9P60153 205 aaKnown RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 MPP1Q00013 466 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 APBA1Q02410 837 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 NHLH2Q02577 135 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 BEAN1Q3B7T3 259 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 SPECC1Q5M775 1068 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 VPS53Q5VIR6 699 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 RNF220Q5VTB9 566 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 GPRIN1Q7Z2K8 1008 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 TBC1D1Q86TI0 1168 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 DPP9Q86TI2 863 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 DENND1CQ8IV53 801 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 KRT78Q8N1N4 520 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 CPEB3Q8NE35 698 aaKnown RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 KIAA1191Q96A73 305 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 TBC1D20Q96BZ9 403 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 CENPOQ9BU64 300 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 B3GNT5Q9BYG0 378 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 NUP62CLQ9H1M0 184 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 CERS4Q9HA82 394 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 ALG13Q9NP73 1137 aaKnown RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 SYBUQ9NX95 663 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 POGKQ9P215 609 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 MSRAQ9UJ68 235 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 GJD2Q9UKL4 321 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 CRYL1Q9Y2S2 319 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 CHST2Q9Y4C5 530 aa5.36□□□□□ -1.55
SCFD1-205ENST00000469043 EPN1Q9Y6I3 576 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-205ENST00000469043 SPATA31A6Q5VVP1 1343 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 A0A087WV62 115 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 PIPSLA2A3N6 862 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 RRN3P2A6NIE6 340 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 H3BML4 177 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 UBXN7O94888 489 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 CD4P01730 458 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 PFKMP08237 780 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 CLEC2LP0C7M8 214 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 SMARCA1P28370 1054 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 FXR1P51114 621 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-205ENST00000469043 CACNB3P54284 484 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 ELLP55199 621 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-205ENST00000469043 MXRA7P84157 204 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 PRKG2Q13237 762 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 BLMHQ13867 455 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 ANO4Q32M45 955 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 COLEC12Q5KU26 742 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 ABHD17BQ5VST6 288 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 EFCAB12Q6NXP0 572 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 FBXO42Q6P3S6 717 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 PDZD4Q76G19 769 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-205ENST00000469043 KIAA0319LQ8IZA0 1049 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 LINC00476Q8WZB0 136 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 C1GALT1C1Q96EU7 318 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 MVB12AQ96EY5 273 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 UBXN10Q96LJ8 280 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 SEC62Q99442 399 aaKnown RBP5.35□□□□□ -1.55
SCFD1-205ENST00000469043 SLC26A6Q9BXS9 759 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 DKK2Q9UBU2 259 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 KCNG1Q9UIX4 513 aa5.35□□□□□ -1.55
SCFD1-205ENST00000469043 A0A1W2PR48 441 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 EYA2O00167 538 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 C5AR1P21730 350 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 CXCR5P32302 372 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 LSP1P33241 339 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 SEC24CP53992 1094 aa5.34□□□□□ -1.55
SCFD1-205ENST00000469043 ICA1Q05084 483 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms