RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 H7C4K7 107 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 SYN3O14994 580 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 ARHGEF15O94989 841 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 PCSK1P29120 753 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 STAT1P42224 750 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 BRCC3P46736 316 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 RAP1GAPP47736 663 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 GSDMDP57764 484 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 TSPY1Q01534 308 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 YWHAHQ04917 246 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-216ENST00000468949 KCNMA1Q12791 1236 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 FAM171A1Q5VUB5 890 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 IQCEQ6IPM2 695 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 ZNF280DQ6N043 979 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 PDXDC1Q6P996 788 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
HDAC6-216ENST00000468949 ARHGEF19Q8IW93 802 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 SLC39A11Q8N1S5 342 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 TMEM86AQ8N2M4 240 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 TMEM130Q8N3G9 435 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 CPLX3Q8WVH0 158 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 JAKMIP2Q96AA8 810 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 SUSD3Q96L08 255 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 TGS1Q96RS0 853 aaKnown RBP8.68□□□□□ -1.02
HDAC6-216ENST00000468949 PLVAPQ9BX97 442 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 XYLT2Q9H1B5 865 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 GANQ9H2C0 597 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 APOBEC3GQ9HC16 384 aaKnown RBP8.68□□□□□ -1.02
HDAC6-216ENST00000468949 GDAP2Q9NXN4 497 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 IMPACTQ9P2X3 320 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 FBXL5Q9UKA1 691 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 MTUS1Q9ULD2 1270 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 ANK1P16157 1881 aa8.68□□□□□ -1.02
HDAC6-216ENST00000468949 PDCD11Q14690 1871 aaKnown RBP8.68□□□□□ -1.02
HDAC6-216ENST00000468949 A0A1W2PQJ5 194 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 LINC01553A4QN01 128 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 A8MXQ7 604 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 F8VZ95 297 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 I3L4J1 428 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 AP5Z1O43299 807 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 ATP8B3O60423 1300 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 B4GALT3O60512 393 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 FGF18O76093 207 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 CSPG5O95196 566 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 WEE2P0C1S8 567 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 TYMPP19971 482 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 IGFBP4P22692 258 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 ASPAP45381 313 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 LHX1P48742 406 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 GLUD2P49448 558 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 PDE6CP51160 858 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 CREMQ03060 361 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 CCDC173Q0VFZ6 552 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 DRAP1Q14919 205 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-216ENST00000468949 ASIC2Q16515 512 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 CHD9Q3L8U1 2897 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 USP41Q3LFD5 358 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 TIGD5Q53EQ6 642 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 TDRD12Q587J7 1177 aaKnown RBP8.67□□□□□ -1.02
HDAC6-216ENST00000468949 FIGNQ5HY92 759 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 WSCD1Q658N2 575 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 OVOS1Q6IE37 1185 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 PHLDB3Q6NSJ2 640 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 GJB7Q6PEY0 223 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 TMEM270Q6UE05 265 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 DPH6Q7L8W6 267 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 VPS36Q86VN1 386 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 PDCL2Q8N4E4 241 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 C3orf58Q8NDZ4 430 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 LMO3Q8TAP4 145 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 SPATA18Q8TC71 538 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 ARNTL2Q8WYA1 636 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
HDAC6-216ENST00000468949 TATDN2Q93075 761 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 ELMO3Q96BJ8 720 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 TNIP3Q96KP6 325 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 ARID3AQ99856 593 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 TTPALQ9BTX7 342 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 HERC2P3Q9BVR0 1158 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 KIAA1671Q9BY89 1806 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 STK33Q9BYT3 514 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 BCO2Q9BYV7 579 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 EDEM3Q9BZQ6 932 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 PDCL3Q9H2J4 239 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 FAM124BQ9H5Z6 455 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-216ENST00000468949 ENTPD7Q9NQZ7 604 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 CISHQ9NSE2 258 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 MARCH5Q9NX47 278 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 MYO6Q9UM54 1294 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 L1RE1Q9UN81 338 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 SSX2IPQ9Y2D8 614 aa8.67□□□□□ -1.02
HDAC6-216ENST00000468949 FNDC1Q4ZHG4 1894 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 COL6A3P12111 3177 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 LRRC53A6NM62 1247 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 F8W810 466 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 M0QZQ0 153 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 C2CD2LO14523 706 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 DPYSL4O14531 572 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms