RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MTMR9Q96QG7 549 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 SDF4Q9BRK5 362 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 TEKT3Q9BXF9 490 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 RAB34Q9BZG1 259 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 BCAS3Q9H6U6 928 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 AGO4Q9HCK5 861 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 PDGFCQ9NRA1 345 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 KCNH7Q9NS40 1196 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 DACT1Q9NYF0 836 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 IMPACTQ9P2X3 320 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 TMEFF2Q9UIK5 374 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ZHX1Q9UKY1 873 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 GABRQQ9UN88 632 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 RNF114Q9Y508 228 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 NPFFR2Q9Y5X5 522 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 TCHHQ07283 1943 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ASTN1O14525 1302 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 IGLV3-22A0A075B6J6 115 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 A0A1W2PQ27 194 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 A0A1W2PQ64 194 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 A0A1W2PQC6 194 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 A0A1W2PQD8 194 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 TLDC2A0PJX2 215 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 C7orf72A4D263 438 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 IPO5O00410 1097 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ENPP3O14638 875 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 TBX3O15119 743 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 NPHS1O60500 1241 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 KINO60870 393 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 PSMD10O75832 226 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ZNF202O95125 648 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 SNAI1O95863 264 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 EFEMP2O95967 443 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 MBD3O95983 291 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 TXNP10599 105 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 PTGS1P23219 599 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 HOXD10P28358 340 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CNGA1P29973 690 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CYP2C19P33261 490 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 PRPHP41219 470 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ADCYAP1R1P41586 468 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 FLT3LGP49771 235 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 LACTBP83111 547 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 SETQ01105 290 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 SP2Q02086 613 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 MAP2K1Q02750 393 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CYP4A11Q02928 519 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 PRKCZQ05513 592 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ITGB3BPQ13352 177 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ORC2Q13416 577 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ACVR2BQ13705 512 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CTTNQ14247 550 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 PDIA5Q14554 519 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 LONRF3Q496Y0 759 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 UTP14CQ5TAP6 766 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 FYB2Q5VWT5 728 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ISM2Q6H9L7 571 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 RSPO2Q6UXX9 243 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 USP53Q70EK8 1073 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 OTOP1Q7RTM1 612 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 MAMDC2Q7Z304 686 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ZSWIM9Q86XI8 627 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 TEX2Q8IWB9 1127 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 DHX37Q8IY37 1157 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CEP57L1Q8IYX8 460 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ABRAQ8N0Z2 381 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CNNM3Q8NE01 707 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 NUP43Q8NFH3 380 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ERMNQ8TAM6 284 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ETNPPLQ8TBG4 499 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CRYGNQ8WXF5 182 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ERCC4Q92889 916 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 SLC5A5Q92911 643 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 LENG9Q96B70 501 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ASIC4Q96FT7 647 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CALML4Q96GE6 196 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 MAML3Q96JK9 1138 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CDHR1Q96JP9 859 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 FAM20AQ96MK3 541 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ZFYVE21Q9BQ24 234 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 EIF2AK1Q9BQI3 630 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 PLCD4Q9BRC7 762 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 MAF1Q9H063 256 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 RNF32Q9H0A6 362 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 UNC45AQ9H3U1 944 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 MLXIPQ9HAP2 919 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 KCNMB3Q9NPA1 279 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 CRTAC1Q9NQ79 661 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 GPR27Q9NS67 375 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 TBC1D22BQ9NU19 505 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 RGL1Q9NZL6 768 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 FLRT1Q9NZU1 646 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 GJD2Q9UKL4 321 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 ACSL6Q9UKU0 697 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 TELO2Q9Y4R8 837 aa4.54□□□□□ -1.68
TMEM39A-204ENST00000468545 PARP14Q460N5 1801 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 FRMPD4Q14CM0 1322 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 MYH7BA7E2Y1 1941 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 A0A087X0B3 334 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms