RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CGNQ9P2M7 1197 aaKnown RBP12.06□□□□□ -0.48
COL4A6-205ENST00000468338 MUTYHQ9UIF7 546 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 TSR3Q9UJK0 312 aaKnown RBP12.06□□□□□ -0.48
COL4A6-205ENST00000468338 FBXL5Q9UKA1 691 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 NR2E1Q9Y466 385 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 ARHGEF37A1IGU5 675 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 WDR27A2RRH5 827 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 GOLGA8IPA6NC78 632 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 GOLGA8JA6NMD2 632 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 C2CD4DB7Z1M9 353 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 ZNF202O95125 648 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 CYP11A1P05108 521 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 C8AP07357 584 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 ATF2P15336 505 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 MCCD1P59942 119 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-205ENST00000468338 LSM11P83369 360 aaKnown RBP eCLIP12.05□□□□□ -0.48
COL4A6-205ENST00000468338 DPYDQ12882 1025 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 ELOAQ14241 798 aaKnown RBP12.05□□□□□ -0.48
COL4A6-205ENST00000468338 KNOP1Q1ED39 458 aaKnown RBP12.05□□□□□ -0.48
COL4A6-205ENST00000468338 TPGS2Q68CL5 300 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 ZNF280DQ6N043 979 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 KRBA2Q6ZNG9 492 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 CCDC149Q6ZUS6 474 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 FSIP1Q8NA03 581 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 KIAA0895Q8NCT3 520 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 SMG7Q92540 1137 aaKnown RBP12.05□□□□□ -0.48
COL4A6-205ENST00000468338 THAP11Q96EK4 314 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 SENP8Q96LD8 212 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 KIAA1586Q9HCI6 787 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 SLC39A2Q9NP94 309 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 DPP3Q9NY33 737 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 RBAKQ9NYW8 714 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-205ENST00000468338 HSPBP1Q9NZL4 362 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 MAP10Q9P2G4 905 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 MAFFQ9ULX9 164 aa12.05□□□□□ -0.48
COL4A6-205ENST00000468338 ZNF233A6NK53 670 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 N4BP1O75113 896 aaKnown RBP12.04□□□□□ -0.48
COL4A6-205ENST00000468338 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-205ENST00000468338 PTK2Q05397 1052 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 SURF1Q15526 300 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 CTXN3Q4LDR2 81 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 LIN9Q5TKA1 542 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 OTOP3Q7RTS5 596 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 CBWD2Q8IUF1 395 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 TCEAL8Q8IYN2 117 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 FMR1NBQ8N0W7 255 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-205ENST00000468338 C1orf127Q8N9H9 656 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 ENGASEQ8NFI3 743 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 EDAQ92838 391 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 DMAC2Q9NW81 257 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 AFF4Q9UHB7 1163 aaKnown RBP12.04□□□□□ -0.48
COL4A6-205ENST00000468338 GPSM3Q9Y4H4 160 aa12.04□□□□□ -0.48
COL4A6-205ENST00000468338 TSC2P49815 1807 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 OR6C75A6NL08 312 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 RHOBTB3O94955 611 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 RPN1P04843 607 aaKnown RBP12.03□□□□□ -0.48
COL4A6-205ENST00000468338 TAF6P49848 677 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 TFAMQ00059 246 aaKnown RBP12.03□□□□□ -0.48
COL4A6-205ENST00000468338 SNW1Q13573 536 aaKnown RBP12.03□□□□□ -0.48
COL4A6-205ENST00000468338 MYBPC2Q14324 1141 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 KCNB1Q14721 858 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 PPM1LQ5SGD2 360 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 SCARA3Q6AZY7 606 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 DSTYKQ6XUX3 929 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 HS2ST1Q7LGA3 356 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 SLC9A9Q8IVB4 645 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 TDRD5Q8NAT2 981 aaKnown RBP12.03□□□□□ -0.48
COL4A6-205ENST00000468338 SLC7A14Q8TBB6 771 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
COL4A6-205ENST00000468338 LRFN3Q9BTN0 628 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 SIX4Q9UIU6 781 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 TIMM13Q9Y5L4 95 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-205ENST00000468338 CLUHO75153 1309 aa12.03□□□□□ -0.48
COL4A6-205ENST00000468338 TRIOO75962 3097 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 KPNA7A9QM74 516 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 CLIC2O15247 247 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 HRO43593 1189 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 SEC24AO95486 1093 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 VNN2O95498 520 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 ODC1P11926 461 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 SP100P23497 879 aaPredicted RBP12.02□□□□□ -0.49
COL4A6-205ENST00000468338 PNPLA4P41247 253 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 ZXDAP98168 799 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 GPR17Q13304 367 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
COL4A6-205ENST00000468338 PTPN21Q16825 1174 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 TMEM31Q5JXX7 168 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 OVOS1Q6IE37 1185 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 LIMS2Q7Z4I7 341 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 USP37Q86T82 979 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 WDR49Q8IV35 697 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 LRRC52Q8N7C0 313 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
COL4A6-205ENST00000468338 OR5B17Q8NGF7 314 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms