RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 NEK11Q8NG66 645 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 BCL7CQ8WUZ0 217 aaPredicted RBP15.78■□□□□ 0.12
DDX56-208ENST00000467318 LSM14BQ9BX40 385 aaKnown RBP15.78■□□□□ 0.12
DDX56-208ENST00000467318 SIX2Q9NPC8 291 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 UBE2TQ9NPD8 197 aaPredicted RBP15.78■□□□□ 0.12
DDX56-208ENST00000467318 FAM207AQ9NSI2 230 aaPredicted RBP15.78■□□□□ 0.12
DDX56-208ENST00000467318 ITIH6Q6UXX5 1313 aa15.78■□□□□ 0.12
DDX56-208ENST00000467318 I3L4J1 428 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 ZSCAN12O43309 604 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 TRIM21P19474 475 aaKnown RBP15.77■□□□□ 0.12
DDX56-208ENST00000467318 FGFR3P22607 806 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 LHX1P48742 406 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 MFAP3P55082 362 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 YWHAEP62258 255 aaKnown RBP15.77■□□□□ 0.12
DDX56-208ENST00000467318 BMS1Q14692 1282 aaKnown RBP15.77■□□□□ 0.12
DDX56-208ENST00000467318 FIGNQ5HY92 759 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 METTL23Q86XA0 190 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 GPR65Q8IYL9 337 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 ELMO3Q96BJ8 720 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 TTPALQ9BTX7 342 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 CHST7Q9NS84 486 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 L1RE1Q9UN81 338 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 POLIQ9UNA4 740 aa15.77■□□□□ 0.12
DDX56-208ENST00000467318 KIAA1671Q9BY89 1806 aa15.77■□□□□ 0.11
DDX56-208ENST00000467318 NLRC5Q86WI3 1866 aa15.77■□□□□ 0.11
DDX56-208ENST00000467318 TMEM265A0A087WTH1 108 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 GOLGA6L9A6NEM1 432 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 H3BNC9 293 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 KLK7P49862 253 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 YWHAHQ04917 246 aaPredicted RBP15.76■□□□□ 0.11
DDX56-208ENST00000467318 SPECC1LQ69YQ0 1117 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 KIAA1841Q6NSI8 718 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 PDXDC1Q6P996 788 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 RRAGAQ7L523 313 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 ARHGEF19Q8IW93 802 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 VPS52Q8N1B4 723 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 FBXO22Q8NEZ5 403 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 ZNF592Q92610 1267 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 OXCT2Q9BYC2 517 aaPredicted RBP15.76■□□□□ 0.11
DDX56-208ENST00000467318 EDEM3Q9BZQ6 932 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 SSX2IPQ9Y2D8 614 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.76■□□□□ 0.11
DDX56-208ENST00000467318 GABRDO14764 452 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 NOL4O94818 638 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 OAZ2O95190 189 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 WEE2P0C1S8 567 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 WSCD1Q658N2 575 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 ANKS3Q6ZW76 656 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 ADGRF2Q8IZF7 708 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 SPPL3Q8TCT6 385 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 HERC2P3Q9BVR0 1158 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 VN1R3Q9BXE9 311 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
DDX56-208ENST00000467318 GANQ9H2C0 597 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 DNAJC12Q9UKB3 198 aa15.76■□□□□ 0.11
DDX56-208ENST00000467318 WARSP23381 471 aaKnown RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 TKTP29401 623 aaKnown RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 CDH8P55286 799 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 POLR2FP61218 127 aaKnown RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 APBA1Q02410 837 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 DSG1Q02413 1049 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 INCA1Q0VD86 236 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 MRPL58Q14197 206 aaKnown RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 OVOS1Q6IE37 1185 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 UNC93AQ86WB7 457 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 THEM5Q8N1Q8 247 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 KREMEN1Q96MU8 473 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 ARID3AQ99856 593 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 STK33Q9BYT3 514 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 DNAI2Q9GZS0 605 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 SMYD3Q9H7B4 428 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 CERS4Q9HA82 394 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 ALG13Q9NP73 1137 aaKnown RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 CISHQ9NSE2 258 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 TRMT1Q9NXH9 659 aaKnown RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 CEP72Q9P209 647 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 BARX2Q9UMQ3 279 aaPredicted RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 TIMM13Q9Y5L4 95 aaPredicted RBP15.75■□□□□ 0.11
DDX56-208ENST00000467318 SZT2Q5T011 3432 aa15.75■□□□□ 0.11
DDX56-208ENST00000467318 USP27XA6NNY8 438 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 H7C4K7 107 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 SOX1O00570 391 aaPredicted RBP15.74■□□□□ 0.11
DDX56-208ENST00000467318 ARHGAP6O43182 974 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 URODP06132 367 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 CTSAP10619 480 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 GNL1P36915 607 aaPredicted RBP15.74■□□□□ 0.11
DDX56-208ENST00000467318 GLUD2P49448 558 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 GPM6BQ13491 265 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 TRIM14Q14142 442 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 PTPN21Q16825 1174 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 VARS2Q5ST30 1063 aaKnown RBP15.74■□□□□ 0.11
DDX56-208ENST00000467318 E4F1Q66K89 784 aaPredicted RBP15.74■□□□□ 0.11
DDX56-208ENST00000467318 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 PDE12Q6L8Q7 609 aaKnown RBP15.74■□□□□ 0.11
DDX56-208ENST00000467318 GJB7Q6PEY0 223 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 TAS1R1Q7RTX1 841 aa15.74■□□□□ 0.11
DDX56-208ENST00000467318 CACNA2D4Q7Z3S7 1137 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms