RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 NT5C1B-RDH14C9J2C7 533 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 GRM6O15303 877 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 ABCG1P45844 678 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 SOX10P56693 466 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 FPGSQ05932 587 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 UAP1L1Q3KQV9 507 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 CYB5RLQ6IPT4 315 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 PTF1AQ7RTS3 328 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 CHPFQ8IZ52 775 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 SLC30A5Q8TAD4 765 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 TFAP2BQ92481 460 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 LPIN2Q92539 896 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 MVB12AQ96EY5 273 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 FBXL20Q96IG2 436 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 PGBD1Q96JS3 809 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 TAAR9Q96RI9 348 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 C1QTNF7Q9BXJ2 289 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 JKAMPQ9P055 326 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 CALCOCO1Q9P1Z2 691 aa5.76□□□□□ -1.49
PRPF40A-205ENST00000467114 SUN1O94901 812 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 SBK3P0C264 359 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 ELFN1P0C7U0 828 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 GPD1P21695 349 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 SRSF4Q08170 494 aaKnown RBP5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 ZNF844Q08AG5 666 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 DYRK1AQ13627 763 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 ZNF267Q14586 743 aaPredicted RBP5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 MIGA2Q7L4E1 593 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 TMPRSS9Q7Z410 1059 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 C1QL2Q7Z5L3 287 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 DIS3LQ8TF46 1054 aaKnown RBP5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 RAB24Q969Q5 203 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 TMX3Q96JJ7 454 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 KLHL32Q96NJ5 620 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 CPNE5Q9HCH3 593 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 TDP1Q9NUW8 608 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 CDYLQ9Y232 598 aa5.75□□□□□ -1.49
PRPF40A-205ENST00000467114 ADM5C9JUS6 153 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 SLC43A1O75387 559 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 ITPKBP27987 946 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 ANXA11P50995 505 aaKnown RBP5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 HK3P52790 923 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 RAB39AQ14964 217 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 CD300EQ496F6 205 aaPredicted RBP5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 FLYWCH1Q4VC44 716 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 EPHA10Q5JZY3 1008 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 TSHZ1Q6ZSZ6 1077 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 RSPH3Q86UC2 560 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 ADGRG5Q8IZF4 528 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 SCARB1Q8WTV0 552 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 SMG7Q92540 1137 aaKnown RBP5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 RNF7Q9UBF6 113 aa5.74□□□□□ -1.49
PRPF40A-205ENST00000467114 WDR27A2RRH5 827 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 ERBB2P04626 1255 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 ALDH2P05091 517 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 MAP2K6P52564 334 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 ZNF280AP59817 542 aaPredicted RBP5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 SNAPC2Q13487 334 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 HLXQ14774 488 aaPredicted RBP5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 TXNRD1Q16881 649 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 PGS1Q32NB8 556 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 MICALCLQ6ZW33 695 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 TTC7BQ86TV6 843 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 FMNL3Q8IVF7 1028 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 CFAP52Q8N1V2 620 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 TOR1AIP2Q8NFQ8 470 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 TTC8Q8TAM2 541 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 MYCBPAPQ8TBZ2 947 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 HASPINQ8TF76 798 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 DPF1Q92782 380 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 C1GALT1C1Q96EU7 318 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 CLPTM1LQ96KA5 538 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 CHPF2Q9P2E5 772 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 GABBR1Q9UBS5 961 aa5.73□□□□□ -1.49
PRPF40A-205ENST00000467114 CCDC195A0A1B0GUA6 201 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 LRRC14BA6NHZ5 514 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 PRSS29PA6NIE9 313 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 E7ENX8 843 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 H3BML4 177 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 SLC16A6O15403 523 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 POU6F2P78424 691 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 NKX6-1P78426 367 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 TAP2Q03519 686 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 GALEQ14376 348 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 TSTD2Q5T7W7 516 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 KIAA1614Q5VZ46 1190 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 PPP4R3AQ6IN85 833 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 ZNF365Q70YC5 407 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 MYO1HQ8N1T3 1032 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 PLBD2Q8NHP8 589 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 SNX19Q92543 992 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 LRIG1Q96JA1 1093 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 ACO2Q99798 780 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 PACSIN1Q9BY11 444 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 SLC29A3Q9BZD2 475 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 NMRK2Q9NPI5 230 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 NOB1Q9ULX3 412 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 AOX1Q06278 1338 aa5.72□□□□□ -1.49
PRPF40A-205ENST00000467114 A6NNZ2 444 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 AP1G1O43747 822 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms