RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 RUBCNQ92622 972 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 BADQ92934 168 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 GTF3C6Q969F1 213 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 HPS3Q969F9 1004 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 PGBD4Q96DM1 585 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 TRMT2BQ96GJ1 504 aaKnown RBP3.8□□□□□ -1.8
SORT1-202ENST00000466471 MAML3Q96JK9 1138 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 TEKT5Q96M29 485 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 SCLT1Q96NL6 688 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 THUMPD2Q9BTF0 503 aaKnown RBP3.8□□□□□ -1.8
SORT1-202ENST00000466471 NAA15Q9BXJ9 866 aaKnown RBP3.8□□□□□ -1.8
SORT1-202ENST00000466471 GPR62Q9BZJ7 368 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 ZDHHC5Q9C0B5 715 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 PPCSQ9HAB8 311 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 PDLIM7Q9NR12 457 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 TRMT13Q9NUP7 481 aaKnown RBP3.8□□□□□ -1.8
SORT1-202ENST00000466471 DLL3Q9NYJ7 618 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 LUZP4Q9P127 313 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 MYO1AQ9UBC5 1043 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 GTF2IRD1Q9UHL9 959 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 SAP30BPQ9UHR5 308 aaKnown RBP3.8□□□□□ -1.8
SORT1-202ENST00000466471 RRP15Q9Y3B9 282 aaKnown RBP3.8□□□□□ -1.8
SORT1-202ENST00000466471 USP16Q9Y5T5 823 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 ACTL7BQ9Y614 415 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 PIEZO2Q9H5I5 2752 aa3.8□□□□□ -1.8
SORT1-202ENST00000466471 SLC12A8A0AV02 714 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 VWA3AA6NCI4 1184 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 VGLL3A8MV65 326 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 BECN2A8MW95 431 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 EIF3CLB5ME19 914 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 H0Y8X5 98 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 H7BY64 318 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 ZNF561-AS1K7EIQ3 104 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 STXBP3O00186 592 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 FOXN3O00409 490 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 SLC27A2O14975 620 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 RNMTO43148 476 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 CYP26A1O43174 497 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 SRGAP3O43295 1099 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PCDHGA12O60330 932 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PRPF6O94906 941 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 PRAMEF1O95521 474 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 CD3EP07766 207 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 POU2F2P09086 479 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 CCDC172P0C7W6 258 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 ZNF865P0CJ78 1059 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 ZNF18P17022 549 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 CMA1P23946 247 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 OAS2P29728 719 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 HALP42357 657 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 FNTBP49356 437 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 SARSP49591 514 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 PPM1FP49593 454 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 ALDH5A1P51649 535 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 GTF2A1P52655 376 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 CACNB3P54284 484 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 EPHB4P54760 987 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 RTP1P59025 263 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PTH1RQ03431 593 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 IFIT5Q13325 482 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 LSAMPQ13449 338 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 EIF4A2Q14240 407 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 ODF1Q14990 250 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 GPR19Q15760 415 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PDCD2Q16342 344 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 ADCK5Q3MIX3 580 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 BEND3Q5T5X7 828 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 MCTP2Q6DN12 878 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 CYP2R1Q6VVX0 501 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 TTLL7Q6ZT98 887 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 C11orf57Q6ZUT1 292 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 CBLL1Q75N03 491 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 G2E3Q7L622 706 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 YTHDF3Q7Z739 585 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 ANKRD23Q86SG2 305 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 DPP9Q86TI2 863 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 CDH24Q86UP0 819 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 VSTM4Q8IW00 320 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 CCDC83Q8IWF9 413 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 Q8N1Y9 231 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 NKAPQ8N5F7 415 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 CEP112Q8N8E3 955 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 XAGE3Q8WTP9 111 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 DNAAF4Q8WXU2 420 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 ATOH1Q92858 354 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 C1GALT1C1Q96EU7 318 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 ZNF274Q96GC6 653 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 TBATAQ96M53 351 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 ZNF396Q96N95 335 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 FCRL3Q96P31 734 aaPredicted RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 EYA3Q99504 573 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 EIF3CQ99613 913 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 FSD1Q9BTV5 496 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 ISCA1Q9BUE6 129 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 HDAC8Q9BY41 377 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PARD6BQ9BYG5 372 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 DEFB129Q9H1M3 183 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 VTA1Q9NP79 307 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 ECHDC1Q9NTX5 307 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 CCM2LQ9NUG4 571 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms