RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 SLC4A11Q8NBS3 891 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 MCEEQ96PE7 176 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 NXF3Q9H4D5 531 aaKnown RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 PARVAQ9NVD7 372 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 PCDHGC3Q9UN70 934 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 SCINQ9Y6U3 715 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 LSM8O95777 96 aaKnown RBP14.38□□□□□ -0.11
UBE4B-206ENST00000466379 TCF4P15884 667 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 FLT3P36888 993 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 SLC1A1P43005 524 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 ADAM17P78536 824 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
UBE4B-206ENST00000466379 DCAF4L1Q3SXM0 396 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 SLC27A1Q6PCB7 646 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 DDX27Q96GQ7 796 aaKnown RBP14.38□□□□□ -0.11
UBE4B-206ENST00000466379 KLHL11Q9NVR0 708 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 TUBGCP4Q9UGJ1 667 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
UBE4B-206ENST00000466379 UTP11Q9Y3A2 253 aaKnown RBP14.38□□□□□ -0.11
UBE4B-206ENST00000466379 CILPO75339 1184 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 CALB1P05937 261 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 AKAP5P24588 427 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 KCNJ1P48048 391 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 OGDHQ02218 1023 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 ZNF252P-AS1Q0IIN9 211 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 NNTQ13423 1086 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 CUL1Q13616 776 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 DNAJC24Q6P3W2 148 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 ERICH1Q86X53 443 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 FAM71BQ8TC56 605 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 SOCS4Q8WXH5 440 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 C18orf25Q96B23 403 aaPredicted RBP14.38□□□□□ -0.11
UBE4B-206ENST00000466379 ITGA11Q9UKX5 1188 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 PIN4Q9Y237 131 aaKnown RBP14.38□□□□□ -0.11
UBE4B-206ENST00000466379 C2CD2Q9Y426 696 aa14.38□□□□□ -0.11
UBE4B-206ENST00000466379 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 TCRBV5S1A1TA0A578 114 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 GOLGA8SH3BPF8 625 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 RNF40O75150 1001 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 C6orf222P0C671 652 aaPredicted RBP14.37□□□□□ -0.11
UBE4B-206ENST00000466379 EIF4BP23588 611 aaKnown RBP14.37□□□□□ -0.11
UBE4B-206ENST00000466379 ATICP31939 592 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 CDH5P33151 784 aaPredicted RBP14.37□□□□□ -0.11
UBE4B-206ENST00000466379 PTGIRP43119 386 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 RBP5P82980 135 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 SNX17Q15036 470 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 CLUL1Q15846 466 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 PTPN20Q4JDL3 420 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 CCDC137Q6PK04 289 aaKnown RBP14.37□□□□□ -0.11
UBE4B-206ENST00000466379 JAMLQ86YT9 394 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 C1orf54Q8WWF1 131 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 SNX27Q96L92 541 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 MED4Q9NPJ6 270 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 GABRQQ9UN88 632 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 PTPN22Q9Y2R2 807 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 CEP83Q9Y592 693 aa14.37□□□□□ -0.11
UBE4B-206ENST00000466379 C17orf102A2RUQ5 167 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 TMEM191CA6NGB0 347 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 IGHA2P01877 340 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 HSPA6P17066 643 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 NDST1P52848 882 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 PURAQ00577 322 aaKnown RBP14.36□□□□□ -0.11
UBE4B-206ENST00000466379 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
UBE4B-206ENST00000466379 IRF5Q13568 498 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 SNX1Q13596 522 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 PPP1R2P3Q6NXS1 205 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 NOTUMQ6P988 496 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 ANKS1BQ7Z6G8 1248 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 CCDC50Q8IVM0 306 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.36□□□□□ -0.11
UBE4B-206ENST00000466379 TMEM176AQ96HP8 235 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 ZIM3Q96PE6 472 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 HEMGNQ9BXL5 484 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 TRIM6Q9C030 488 aaPredicted RBP14.36□□□□□ -0.11
UBE4B-206ENST00000466379 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 KLK14Q9P0G3 267 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 HSF2BPO75031 334 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 RECQL4O94761 1208 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 MICAL2O94851 1124 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 CHRNA3P32297 505 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 INHBEP58166 350 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 RHOT1Q8IXI2 618 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 HEXIM2Q96MH2 286 aaKnown RBP14.36□□□□□ -0.11
UBE4B-206ENST00000466379 CPXM1Q96SM3 734 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 ZNF518BQ9C0D4 1074 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 IP6K2Q9UHH9 426 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 SNX24Q9Y343 169 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 SCN1AP35498 2009 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 DNAH12Q6ZR08 3092 aa14.36□□□□□ -0.11
UBE4B-206ENST00000466379 F8VP50 259 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 MED7O43513 233 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 PAEPP09466 180 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 P4HA1P13674 534 aa14.35□□□□□ -0.11
UBE4B-206ENST00000466379 AKR1A1P14550 325 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms