RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 TPGS2Q68CL5 300 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
AGRN-204ENST00000466223 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 ZNF461Q8TAF7 563 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 XYLT2Q9H1B5 865 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 SNX25Q9H3E2 840 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 DDX43Q9NXZ2 648 aaKnown RBP17.07■□□□□ 0.32
AGRN-204ENST00000466223 THEGQ9P2T0 379 aa17.07■□□□□ 0.32
AGRN-204ENST00000466223 P4HA2O15460 535 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 ADAM12O43184 909 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 GLP2RO95838 553 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 TPM2P07951 284 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 SPATA31D3P0C874 917 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 PCSK1P29120 753 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 ROR1Q01973 937 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 MYL5Q02045 173 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 KCNC3Q14003 757 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 CBWD6Q4V339 395 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 CBWD3Q5JTY5 395 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 CBWD5Q5RIA9 395 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 ANKRD54Q6NXT1 300 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 LILRA6Q6PI73 481 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 RSPO2Q6UXX9 243 aaPredicted RBP17.06■□□□□ 0.32
AGRN-204ENST00000466223 SPATA31D4Q6ZUB0 917 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 DCP1BQ8IZD4 617 aaKnown RBP17.06■□□□□ 0.32
AGRN-204ENST00000466223 KREMEN2Q8NCW0 462 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 ANKRD20A12PQ8NF67 263 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 ACBD6Q9BR61 282 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 DNAI2Q9GZS0 605 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 MAN1C1Q9NR34 630 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 MAFFQ9ULX9 164 aa17.06■□□□□ 0.32
AGRN-204ENST00000466223 BARX2Q9UMQ3 279 aaPredicted RBP17.06■□□□□ 0.32
AGRN-204ENST00000466223 MTCL1Q9Y4B5 1905 aaKnown RBP17.06■□□□□ 0.32
AGRN-204ENST00000466223 SMTNL1A8MU46 457 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 H3BQ06 376 aaPredicted RBP17.05■□□□□ 0.32
AGRN-204ENST00000466223 PMM2O15305 246 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 TACC1O75410 805 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 TRIM21P19474 475 aaKnown RBP17.05■□□□□ 0.32
AGRN-204ENST00000466223 GNL1P36915 607 aaPredicted RBP17.05■□□□□ 0.32
AGRN-204ENST00000466223 LTBRP36941 435 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 NOP14P78316 857 aaKnown RBP17.05■□□□□ 0.32
AGRN-204ENST00000466223 RBM10P98175 930 aaKnown RBP17.05■□□□□ 0.32
AGRN-204ENST00000466223 GPR17Q13304 367 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 UVSSAQ2YD98 709 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 HSP90AA4PQ58FG1 418 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 CES5AQ6NT32 575 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 CCDC149Q6ZUS6 474 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 OR6B3Q8NGW1 331 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.05■□□□□ 0.321e-13■■■■■ 64.4
AGRN-204ENST00000466223 SAMSN1Q9NSI8 373 aaKnown RBP17.05■□□□□ 0.32
AGRN-204ENST00000466223 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
AGRN-204ENST00000466223 CD207Q9UJ71 328 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 FAM50BQ9Y247 325 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 COQ4Q9Y3A0 265 aa17.05■□□□□ 0.32
AGRN-204ENST00000466223 PLXNA3P51805 1871 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 WDR27A2RRH5 827 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 BECN2A8MW95 431 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 KCNJ18B7U540 433 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 PES1O00541 588 aaKnown RBP17.04■□□□□ 0.32
AGRN-204ENST00000466223 PRRG1O14668 218 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 TBX10O75333 385 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 ABLIM3O94929 683 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 CAVIN2O95810 425 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
AGRN-204ENST00000466223 ATF2P15336 505 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
AGRN-204ENST00000466223 WARSP23381 471 aaKnown RBP17.04■□□□□ 0.32
AGRN-204ENST00000466223 EEF1GP26641 437 aaKnown RBP17.04■□□□□ 0.32
AGRN-204ENST00000466223 DLX2Q07687 328 aaPredicted RBP17.04■□□□□ 0.32
AGRN-204ENST00000466223 SMARCB1Q12824 385 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 KCNJ12Q14500 433 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 MAN2A1Q16706 1144 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 PUS10Q3MIT2 529 aaKnown RBP17.04■□□□□ 0.32
AGRN-204ENST00000466223 SPOPLQ6IQ16 392 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 SCARA5Q6ZMJ2 495 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 RTL10Q7L3V2 364 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 LIMS2Q7Z4I7 341 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 FAXDC2Q96IV6 333 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 ZCWPW1Q9H0M4 648 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 SFXN1Q9H9B4 322 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 PRDM6Q9NQX0 595 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 CLEC1BQ9P126 229 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 FBXW11Q9UKB1 542 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 POLIQ9UNA4 740 aa17.04■□□□□ 0.32
AGRN-204ENST00000466223 TSC2P49815 1807 aa17.03■□□□□ 0.32
AGRN-204ENST00000466223 A8MXQ7 604 aa17.03■□□□□ 0.32
AGRN-204ENST00000466223 GABRDO14764 452 aa17.03■□□□□ 0.32
AGRN-204ENST00000466223 PDGFRBP09619 1106 aa17.03■□□□□ 0.32
AGRN-204ENST00000466223 OR4Q2P0C623 313 aa17.03■□□□□ 0.32
AGRN-204ENST00000466223 ZNF165P49910 485 aa17.03■□□□□ 0.32
AGRN-204ENST00000466223 MRPS5P82675 430 aaKnown RBP17.03■□□□□ 0.32
AGRN-204ENST00000466223 ITIH3Q06033 890 aa17.03■□□□□ 0.32
AGRN-204ENST00000466223 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms