RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 SBK3P0C264 359 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 CYP2D6P10635 497 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 POU3F3P20264 500 aaPredicted RBP3.03□□□□□ -1.92
CCDC93-205ENST00000466171 MPGP29372 298 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 NDUFV1P49821 464 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 GNAI1P63096 354 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 MC2RQ01718 297 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 TARDBPQ13148 414 aaKnown RBP eCLIP3.03□□□□□ -1.92
CCDC93-205ENST00000466171 LAMB3Q13751 1172 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 CLUL1Q15846 466 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 PXDC1Q5TGL8 231 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 SLC18B1Q6NT16 456 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 SPATS2Q86XZ4 545 aaKnown RBP3.03□□□□□ -1.92
CCDC93-205ENST00000466171 FANCBQ8NB91 859 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 TMIEQ8NEW7 156 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 RFKQ969G6 155 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 HMCESQ96FZ2 354 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 PUS7Q96PZ0 661 aaKnown RBP3.03□□□□□ -1.92
CCDC93-205ENST00000466171 SLC2A13Q96QE2 648 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 ACTRT3Q9BYD9 372 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 SIK2Q9H0K1 926 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 ARHGEF3Q9NR81 526 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 ZNF277Q9NRM2 450 aaPredicted RBP3.03□□□□□ -1.92
CCDC93-205ENST00000466171 SERTAD4Q9NUC0 356 aa3.03□□□□□ -1.92
CCDC93-205ENST00000466171 GNL3LQ9NVN8 582 aaKnown RBP3.03□□□□□ -1.92
CCDC93-205ENST00000466171 VWC2LB2RUY7 222 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 PPEF2O14830 753 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 PRKD3O94806 890 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 LATS1O95835 1130 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 CHEK2O96017 543 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 TUBB4AP04350 444 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 RHOP08100 348 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 ITGALP20701 1170 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 TKTP29401 623 aaKnown RBP3.02□□□□□ -1.93
CCDC93-205ENST00000466171 TBCCQ15814 346 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 PROSER3Q2NL68 480 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 AARS2Q5JTZ9 985 aaKnown RBP3.02□□□□□ -1.93
CCDC93-205ENST00000466171 PRAMEF17Q5VTA0 474 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 ANKRD16Q6P6B7 361 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 SLC30A10Q6XR72 485 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 ZNF517Q6ZMY9 492 aaPredicted RBP3.02□□□□□ -1.93
CCDC93-205ENST00000466171 TMPRSS9Q7Z410 1059 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 PDSS2Q86YH6 399 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 WDR66Q8TBY9 1149 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 POC1BQ8TC44 478 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 IFI44Q8TCB0 444 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 SCAMP4Q969E2 229 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 RAB24Q969Q5 203 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 WACQ9BTA9 647 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 AMBRA1Q9C0C7 1298 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 TUBA8Q9NY65 449 aaPredicted RBP3.02□□□□□ -1.93
CCDC93-205ENST00000466171 VSX1Q9NZR4 365 aaPredicted RBP3.02□□□□□ -1.93
CCDC93-205ENST00000466171 CALCOCO1Q9P1Z2 691 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 SERGEFQ9UGK8 458 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 PCDHA13Q9Y5I0 950 aa3.02□□□□□ -1.93
CCDC93-205ENST00000466171 CNTNAP2Q9UHC6 1331 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 LOC105371045A0A1W2PR82 267 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 MYMKA6NI61 221 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 SMIM22K7EJ46 135 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 QSOX1O00391 747 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 SNHG28P0DPA3 235 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 CD6P30203 668 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 CYP2C19P33261 490 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 KLHL22Q53GT1 634 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 ZNF618Q5T7W0 954 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 RNF219Q5W0B1 726 aaPredicted RBP3.01□□□□□ -1.93
CCDC93-205ENST00000466171 ZNF66Q6ZN08 573 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 WDR53Q7Z5U6 358 aaPredicted RBP3.01□□□□□ -1.93
CCDC93-205ENST00000466171 AFAP1L2Q8N4X5 818 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 RGMAQ96B86 450 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 FAM136AQ96C01 138 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 LRIG1Q96JA1 1093 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 CNPPD1Q9BV87 410 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 BRD9Q9H8M2 597 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 RLIMQ9NVW2 624 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 SIDT1Q9NXL6 827 aaKnown RBP3.01□□□□□ -1.93
CCDC93-205ENST00000466171 ELOVL5Q9NYP7 299 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 CFAP97Q9P2B7 532 aa3.01□□□□□ -1.93
CCDC93-205ENST00000466171 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.01□□□□□ -1.93
CCDC93-205ENST00000466171 H3BNC9 293 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 INSIG1O15503 277 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 GPR39O43194 453 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 CNGA1P29973 690 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 FOXG1P55316 489 aaPredicted RBP3□□□□□ -1.93
CCDC93-205ENST00000466171 ZNF280AP59817 542 aaPredicted RBP3□□□□□ -1.93
CCDC93-205ENST00000466171 KLF1Q13351 362 aaPredicted RBP3□□□□□ -1.93
CCDC93-205ENST00000466171 GTF2H3Q13889 308 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 SUPT20HL1Q3ZLR7 823 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 FLYWCH1Q4VC44 716 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 CEP78Q5JTW2 689 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 RBM20Q5T481 1227 aaKnown RBP3□□□□□ -1.93
CCDC93-205ENST00000466171 CRELD2Q6UXH1 353 aaPredicted RBP3□□□□□ -1.93
CCDC93-205ENST00000466171 TECPR1Q7Z6L1 1165 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 CNGA4Q8IV77 575 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 PSD4Q8NDX1 1056 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 FBXO41Q8TF61 875 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 WASF1Q92558 559 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 CLPTM1LQ96KA5 538 aa3□□□□□ -1.93
CCDC93-205ENST00000466171 NELL2Q99435 816 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms