RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZNF512Q96ME7 567 aaPredicted RBP23.48■■□□□ 1.35
LIME1-203ENST00000465591 ZNF560Q96MR9 790 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 LRRC3Q9BY71 257 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 INTS13Q9NVM9 706 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 WNT16Q9UBV4 365 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 DSEQ9UL01 958 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 UBE4BO95155 1302 aa23.48■■□□□ 1.35
LIME1-203ENST00000465591 ZNF233A6NK53 670 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 EPHA5P54756 1037 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 SLC39A12Q504Y0 691 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 MTSS1LQ765P7 747 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 PDZD4Q76G19 769 aaPredicted RBP23.47■■□□□ 1.35
LIME1-203ENST00000465591 CSGALNACT2Q8N6G5 542 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 RDH13Q8NBN7 331 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 PLA2G2FQ9BZM2 168 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 SLC2A4RGQ9NR83 387 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 GDE1Q9NZC3 331 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 ITGA11Q9UKX5 1188 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 L1RE1Q9UN81 338 aa23.47■■□□□ 1.35
LIME1-203ENST00000465591 FAM237AA0A1B0GTK4 181 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 TMEM191BP0C7N4 346 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 MYL4P12829 197 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 PNPLA4P41247 253 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 CYP2J2P51589 502 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 NDUFA8P51970 172 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 BFSP1Q12934 665 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 STK4Q13043 487 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 IQCEQ6IPM2 695 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 METTL23Q86XA0 190 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 TMC8Q8IU68 726 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 ELMOD1Q8N336 334 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 PDCL2Q8N4E4 241 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 LRRC52Q8N7C0 313 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 KIAA0895Q8NCT3 520 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 ZSWIM3Q96MP5 696 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 GDPD2Q9HCC8 539 aa23.46■■□□□ 1.35
LIME1-203ENST00000465591 KRT19P08727 400 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 FCARP24071 287 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 CLCN5P51795 746 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 SNRNP35Q16560 246 aaKnown RBP23.45■■□□□ 1.34
LIME1-203ENST00000465591 KMT5BQ4FZB7 885 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 CYP4A22Q5TCH4 519 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 TANGO2Q6ICL3 276 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 OSTM1Q86WC4 334 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 SHKBP1Q8TBC3 707 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 GZF1Q9H116 711 aaPredicted RBP23.45■■□□□ 1.34
LIME1-203ENST00000465591 GOLPH3LQ9H4A5 285 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 ZNF334Q9HCZ1 680 aaPredicted RBP23.45■■□□□ 1.34
LIME1-203ENST00000465591 ASAH2Q9NR71 780 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 TMLHEQ9NVH6 421 aa23.45■■□□□ 1.34
LIME1-203ENST00000465591 ZNF197O14709 1029 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 MICAL2O94851 1124 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 PRR29P0C7W0 189 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 AOC1P19801 751 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 RBP5P82980 135 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 KNOP1Q1ED39 458 aaKnown RBP23.44■■□□□ 1.34
LIME1-203ENST00000465591 FAM78AQ5JUQ0 283 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 THEM5Q8N1Q8 247 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 ANKRD36BP1Q96IX9 119 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 PHOX2BQ99453 314 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 KIAA1586Q9HCI6 787 aa23.44■■□□□ 1.34
LIME1-203ENST00000465591 HCRTO43612 131 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 ATF6P18850 670 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 SYKP43405 635 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 EPHB3P54753 998 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 CYP24A1Q07973 514 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 PLD1Q13393 1074 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 TEAD2Q15562 447 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 CCDC142Q17RM4 750 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 XXYLT1Q8NBI6 393 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 SEPT5Q99719 369 aaPredicted RBP23.43■■□□□ 1.34
LIME1-203ENST00000465591 LPIN3Q9BQK8 851 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 TBC1D17Q9HA65 648 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 ARHGEF3Q9NR81 526 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 EXOC1Q9NV70 894 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 GDAP2Q9NXN4 497 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 USP25Q9UHP3 1055 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 SNX9Q9Y5X1 595 aa23.43■■□□□ 1.34
LIME1-203ENST00000465591 NCANO14594 1321 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 GALR2O43603 387 aaPredicted RBP23.42■■□□□ 1.34
LIME1-203ENST00000465591 ECI2O75521 394 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 ACAT1P24752 427 aaKnown RBP23.42■■□□□ 1.34
LIME1-203ENST00000465591 HOXD11P31277 338 aaPredicted RBP23.42■■□□□ 1.34
LIME1-203ENST00000465591 ALDH1A3P47895 512 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 PTPN5P54829 565 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 SNRPFP62306 86 aaKnown RBP23.42■■□□□ 1.34
LIME1-203ENST00000465591 PSMD6Q15008 389 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 SURF1Q15526 300 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 DUOXA2Q1HG44 320 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 HS2ST1Q7LGA3 356 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 DNAJB7Q7Z6W7 309 aaPredicted RBP23.42■■□□□ 1.34
LIME1-203ENST00000465591 WDR49Q8IV35 697 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 C12orf56Q8IXR9 622 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 FSIP1Q8NA03 581 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 PLEKHO2Q8TD55 490 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 ASB16Q96NS5 453 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 PRRX2Q99811 253 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 SCAND2PQ9GZW5 306 aaPredicted RBP23.42■■□□□ 1.34
LIME1-203ENST00000465591 HSFX1Q9UBD0 423 aa23.42■■□□□ 1.34
LIME1-203ENST00000465591 ATP6V1DQ9Y5K8 247 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms