RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 ARMCX3Q9UH62 379 aaPredicted RBP12.92□□□□□ -0.34
RPUSD3-211ENST00000464783 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
RPUSD3-211ENST00000464783 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 ZMYND10O75800 440 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 WEE2P0C1S8 567 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 MTHFRP42898 656 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 NLRP12P59046 1061 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 MYL7Q01449 175 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 TSPY1Q01534 308 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 ADCY1Q08828 1119 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 SMAD2Q15796 467 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 ZACNQ401N2 412 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 ZNF667Q5HYK9 610 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 TPGS2Q68CL5 300 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 SV2AQ7L0J3 742 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 FILIP1Q7Z7B0 1213 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 SMG7Q92540 1137 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 NECTIN4Q96NY8 510 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 PGLYRP2Q96PD5 576 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 DUSP9Q99956 384 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 METTL14Q9HCE5 456 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 TMEM8AQ9HCN3 771 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 ZDHHC7Q9NXF8 308 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 DDX43Q9NXZ2 648 aaKnown RBP12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 RWDD2AQ9UIY3 292 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 CDH22Q9UJ99 828 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 POLIQ9UNA4 740 aa12.91□□□□□ -0.34
RPUSD3-211ENST00000464783 C5orf42Q9H799 3197 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 XYLBO75191 536 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 ABLIM3O94929 683 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 VNN1O95497 513 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 STAU1O95793 577 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 GNA14O95837 355 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 HLA-DRAP01903 254 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 LRG1P02750 347 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 P4HA1P13674 534 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 ATF2P15336 505 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 GTF2H1P32780 548 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 LHX1P48742 406 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 MXI1P50539 228 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 PPP3CAQ08209 521 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SOWAHAQ2M3V2 549 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 DPCR1Q3MIW9 517 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SLC39A12Q504Y0 691 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 C1orf220Q5T0J3 134 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 KRT39Q6A163 491 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 FOXR2Q6PJQ5 311 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SASS6Q6UVJ0 657 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 DPH6Q7L8W6 267 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 GPR149Q86SP6 731 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 CREBRFQ8IUR6 639 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 DCP1BQ8IZD4 617 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 CMASQ8NFW8 434 aaPredicted RBP12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 OR10T2Q8NGX3 314 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SPATA18Q8TC71 538 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 TMEM209Q96SK2 561 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 UHRF1Q96T88 793 aaPredicted RBP12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 PRKD2Q9BZL6 878 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 SNX25Q9H3E2 840 aa12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 AFF4Q9UHB7 1163 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-211ENST00000464783 CCL16O15467 120 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 HNRNPA1P09651 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 PTMSP20962 102 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 ACAT1P24752 427 aaKnown RBP12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 PCSK1P29120 753 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 GPR17Q13304 367 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 UVSSAQ2YD98 709 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 CYP26C1Q6V0L0 522 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 TAS1R2Q8TE23 839 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 SUSD6Q92537 303 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 TAF4BQ92750 862 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 XYLT2Q9H1B5 865 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 PRKAG3Q9UGI9 489 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 MAFFQ9ULX9 164 aa12.89□□□□□ -0.35
RPUSD3-211ENST00000464783 MTMR11A4FU01 709 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 SEC24AO95486 1093 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 WARSP23381 471 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 SP100P23497 879 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 HOXA9P31269 272 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 CDR1P51861 262 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 SMARCB1Q12824 385 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 DUSP4Q13115 394 aa12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 INTS6LQ5JSJ4 861 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-211ENST00000464783 RTL10Q7L3V2 364 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms