RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PHKA2P46019 1235 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 RAP1GAPP47736 663 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 DDR1Q08345 913 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 NLRP9Q7RTR0 991 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 RSPH3Q86UC2 560 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 IQCKQ8N0W5 287 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 USP33Q8TEY7 942 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 SKA2Q8WVK7 121 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 SERPINB12Q96P63 405 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 DEFB129Q9H1M3 183 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 LRRC4BQ9NT99 713 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 RNF19AQ9NV58 838 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 DLGAP2Q9P1A6 1054 aa9.53□□□□□ -0.88
HPS4-208ENST00000464362 FAF1Q9UNN5 650 aaPredicted RBP9.53□□□□□ -0.88
HPS4-208ENST00000464362 CAMTA1Q9Y6Y1 1673 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 TRAPPC3O43617 180 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 SH3BP5O60239 455 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 PFDN1O60925 122 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 RXRBP28702 533 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 CAP2P40123 477 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 MYL6P60660 151 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 ITGB3BPQ13352 177 aaPredicted RBP9.52□□□□□ -0.88
HPS4-208ENST00000464362 DGKZQ13574 1117 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 BMPR2Q13873 1038 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 QPCTQ16769 361 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 PCNX4Q63HM2 1172 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 DSTYKQ6XUX3 929 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.88
HPS4-208ENST00000464362 CEP120Q8N960 986 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 FBXO36Q8NEA4 188 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 TUBB6Q9BUF5 446 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 Q9H521 79 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 CYP26B1Q9NR63 512 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 DDX56Q9NY93 547 aaKnown RBP9.52□□□□□ -0.88
HPS4-208ENST00000464362 ADA2Q9NZK5 511 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 ZNRF3Q9ULT6 936 aa9.52□□□□□ -0.88
HPS4-208ENST00000464362 MRPL42Q9Y6G3 142 aaKnown RBP9.52□□□□□ -0.88
HPS4-208ENST00000464362 ZWINTO95229 277 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 CBX6O95503 412 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 GZMAP12544 262 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 ETS1P14921 441 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 CLCN3P51790 818 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 SKOR1P84550 965 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 PRPSAP1Q14558 356 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 ANGEL2Q5VTE6 544 aaKnown RBP9.52□□□□□ -0.89
HPS4-208ENST00000464362 MTDHQ86UE4 582 aaKnown RBP9.52□□□□□ -0.89
HPS4-208ENST00000464362 FUKQ8N0W3 1084 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 PRELID2Q8N945 189 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 CEP70Q8NHQ1 597 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 SYTL5Q8TDW5 730 aaPredicted RBP9.52□□□□□ -0.89
HPS4-208ENST00000464362 NEUROG2Q9H2A3 272 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 ERVK-5Q9HDB9 667 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 SENP1Q9P0U3 644 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 ANKRD26Q9UPS8 1709 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 DGKIO75912 1065 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 NOL4O94818 638 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 SPATA31C1P0DKV0 1188 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 RARBP10826 455 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 OSBPP22059 807 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 Q4G0T1 1027 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 MOXD1Q6UVY6 613 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 MFSD7Q6UXD7 560 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 TRIM67Q6ZTA4 783 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 HACE1Q8IYU2 909 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 WDR18Q9BV38 432 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 KCTD10Q9H3F6 313 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 TMX2Q9Y320 296 aa9.52□□□□□ -0.89
HPS4-208ENST00000464362 TGFB1I1O43294 461 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 EXTL3O43909 919 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 ITGB3P05106 788 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 ICAM1P05362 532 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 SGSM1Q2NKQ1 1148 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 C1orf186Q6ZWK4 172 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 RASSF3Q86WH2 238 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 SCN4BQ8IWT1 228 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 PARD3BQ8TEW8 1205 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 ATP6V1E2Q96A05 226 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 MTBPQ96DY7 904 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 GMCL1Q96IK5 515 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 PDCD2LQ9BRP1 358 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 NIF3L1Q9GZT8 377 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 RANBP17Q9H2T7 1088 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 MANSC1Q9H8J5 431 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 KCNMB3Q9NPA1 279 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 BFARQ9NZS9 450 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 A0A0A6YYK5 440 aaPredicted RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 APOL1O14791 398 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 P4HA2O15460 535 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 XPOTO43592 962 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 BNIP3LO60238 219 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 HUS1O60921 280 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 PECAM1P16284 738 aaPredicted RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 HNRNPH3P31942 346 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 CDH8P55286 799 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 STX3Q13277 289 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 TSTA3Q13630 321 aaPredicted RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 PIGHQ14442 188 aaPredicted RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 CHI3L2Q15782 390 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms