RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 MTMR12Q9C0I1 747 aa20.79■□□□□ 0.92
CCHCR1-210ENST00000464012 IRF2BPLQ9H1B7 796 aa20.79■□□□□ 0.92
CCHCR1-210ENST00000464012 DNAJC25Q9H1X3 360 aa20.79■□□□□ 0.92
CCHCR1-210ENST00000464012 SLITRK6Q9H5Y7 841 aa20.79■□□□□ 0.92
CCHCR1-210ENST00000464012 EIF3DO15371 548 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 MOSPD3O75425 235 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 ECI2O75521 394 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 DCNP07585 359 aaKnown RBP20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 HOXD13P35453 343 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 GRM2Q14416 872 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 TEAD2Q15562 447 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 FAM78AQ5JUQ0 283 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 SCARA3Q6AZY7 606 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 UNC13DQ70J99 1090 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 CBWD2Q8IUF1 395 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 CCDC105Q8IYK2 499 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 CSGALNACT2Q8N6G5 542 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 BORCS6Q96GS4 357 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 CHAMP1Q96JM3 812 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 FOXQ1Q9C009 403 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 ZCWPW1Q9H0M4 648 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 HSPBP1Q9NZL4 362 aa20.78■□□□□ 0.92
CCHCR1-210ENST00000464012 OBSL1O75147 1896 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 A0A1W2PRU2 124 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 FCARP24071 287 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 PNPLA4P41247 253 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 EPHA5P54756 1037 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 MLF2Q15773 248 aaPredicted RBP20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 MGAT5BQ3V5L5 792 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 PHLDB3Q6NSJ2 640 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 CNNM4Q6P4Q7 775 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 EPM2AIP1Q7L775 607 aaPredicted RBP20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 TMC8Q8IU68 726 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 CEP57L1Q8IYX8 460 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 DTWD2Q8NBA8 298 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 LEMD2Q8NC56 503 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 SHKBP1Q8TBC3 707 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 FAM200AQ8TCP9 573 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 ELSPBP1Q96BH3 223 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 ANKRD36BP1Q96IX9 119 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 ZSWIM3Q96MP5 696 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 ZFP14Q9HCL3 533 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 ABI2Q9NYB9 513 aaPredicted RBP20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 SERTAD1Q9UHV2 236 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 ITGA11Q9UKX5 1188 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 COL4A2P08572 1712 aa20.77■□□□□ 0.92
CCHCR1-210ENST00000464012 PTPRJQ12913 1337 aa20.77■□□□□ 0.91
CCHCR1-210ENST00000464012 DENND4CQ5VZ89 1909 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 ZNF233A6NK53 670 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 KIAA0391O15091 583 aaKnown RBP20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 CLIC2O15247 247 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 MICAL2O94851 1124 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 PFKPQ01813 784 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 CUL4BQ13620 913 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 RDH13Q8NBN7 331 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 ZSCAN18Q8TBC5 510 aaPredicted RBP20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 ZNF507Q8TCN5 953 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 SHDQ96IW2 340 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 ASB16Q96NS5 453 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 LPIN3Q9BQK8 851 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 ZNF334Q9HCZ1 680 aaPredicted RBP20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 SLC39A2Q9NP94 309 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 RCOR1Q9UKL0 485 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 L1RE1Q9UN81 338 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 SIT1Q9Y3P8 196 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 PATJQ8NI35 1801 aa20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 ZNF638Q14966 1978 aaKnown RBP20.76■□□□□ 0.91
CCHCR1-210ENST00000464012 LRRN2O75325 713 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 CYP2J2P51589 502 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 ANGPT1Q15389 498 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 SLC44A4Q53GD3 710 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 LRRTM3Q86VH5 581 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 PDCL2Q8N4E4 241 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 LRRC52Q8N7C0 313 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 PJA1Q8NG27 643 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 OR5B17Q8NGF7 314 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 SPATA32Q96LK8 384 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 LRRC3Q9BY71 257 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 AGPAT3Q9NRZ7 376 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 SIX4Q9UIU6 781 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 R3HCC1Q9Y3T6 440 aaKnown RBP20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 SNX9Q9Y5X1 595 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 UBE4BO95155 1302 aa20.75■□□□□ 0.91
CCHCR1-210ENST00000464012 TGFB1I1O43294 461 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 HUS1O60921 280 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 TNNC2P02585 160 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 ATF6P18850 670 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 CD72P21854 359 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 ACAT1P24752 427 aaKnown RBP20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 VIPR2P41587 438 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 STARD6P59095 220 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 RBP5P82980 135 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 TSPY1Q01534 308 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 EHHADHQ08426 723 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 UBXN2BQ14CS0 331 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 VEPH1Q14D04 833 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 STXBP5Q5T5C0 1151 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 TPRG1Q6ZUI0 275 aa20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 DNAJB7Q7Z6W7 309 aaPredicted RBP20.74■□□□□ 0.91
CCHCR1-210ENST00000464012 DCP1BQ8IZD4 617 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms