RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 THEGQ9P2T0 379 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 DENND2AQ9ULE3 1009 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 ZFR2Q9UPR6 939 aaKnown RBP4.28□□□□□ -1.72
SCFD1-204ENST00000463622 ATP11BQ9Y2G3 1177 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 RABGAP1Q9Y3P9 1069 aa4.28□□□□□ -1.72
SCFD1-204ENST00000463622 BDP1A6H8Y1 2624 aa4.28□□□□□ -1.73
SCFD1-204ENST00000463622 M0R2C6 588 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 AKAP8O43823 692 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 EFCAB14O75071 495 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 CYBAP13498 195 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 CHMLP26374 656 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 RAC3P60763 192 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 GRB14Q14449 540 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 BMS1Q14692 1282 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 TRIM61Q5EBN2 209 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 GJC2Q5T442 439 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 GORABQ5T7V8 394 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 ZGPATQ8N5A5 531 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 HIPK4Q8NE63 616 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 ZSWIM2Q8NEG5 633 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 THAP3Q8WTV1 239 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 RILPL2Q969X0 211 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 TIFAQ96CG3 184 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 CLUHP3Q96NS8 147 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 CELF4Q9BZC1 486 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 ZDHHC5Q9C0B5 715 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 C12orf65Q9H3J6 166 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 EPHX3Q9H6B9 360 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 KANSL2Q9H9L4 492 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 AS3MTQ9HBK9 375 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 HERC5Q9UII4 1024 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 MAGEL2Q9UJ55 1249 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 TCAF1Q9Y4C2 921 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 PDS5AQ29RF7 1337 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 MATN2O00339 956 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 SEPT4O43236 478 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 ASNSP08243 561 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 UQCRFS1P1P0C7P4 283 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 CYP2C19P33261 490 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 ADCYAP1R1P41586 468 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 BTDP43251 543 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 STAT5BP51692 787 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 DYNLL1P63167 89 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 LRRC41Q15345 812 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 ZNF568Q3ZCX4 644 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 C2orf27AQ580R0 203 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 CCDC158Q5M9N0 1113 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 VPS53Q5VIR6 699 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 ANKRD33Q7Z3H0 272 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 FILIP1Q7Z7B0 1213 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 FOXP4Q8IVH2 680 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 FUKQ8N0W3 1084 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 Q8N1X5 172 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 KBTBD3Q8NAB2 608 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 C12orf42Q96LP6 360 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 FSD1Q9BTV5 496 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 SCAND2PQ9GZW5 306 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 PUS7LQ9H0K6 701 aaKnown RBP4.27□□□□□ -1.73
SCFD1-204ENST00000463622 TRIM39Q9HCM9 518 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 KCNH7Q9NS40 1196 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 TMOD4Q9NZQ9 345 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 PI4KBQ9UBF8 816 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 NR2E1Q9Y466 385 aa4.27□□□□□ -1.73
SCFD1-204ENST00000463622 CHD9Q3L8U1 2897 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 DDX60LQ5H9U9 1706 aaKnown RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 SLC12A8A0AV02 714 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MUSKO15146 869 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 PRKAB2O43741 272 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 STRNO43815 780 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CDC14BO60729 498 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CUTAO60888 179 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 IDH1O75874 414 aaKnown RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CLTBP09497 229 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 C6P13671 934 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CR2P20023 1033 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 POU3F3P20264 500 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CNGA1P29973 690 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 ADD2P35612 726 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 ETV4P43268 484 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CCNA1P78396 465 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MECOMQ03112 1051 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 PTH1RQ03431 593 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 PICALMQ13492 652 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 ACAP1Q15027 740 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 PCOLCEQ15113 449 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 TMEM177Q53S58 311 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 ZC3H12BQ5HYM0 836 aaKnown RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CATSPEREQ5SY80 951 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 SPTY2D1Q68D10 685 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CATSPERGQ6ZRH7 1159 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 CCAR1Q8IX12 1150 aaKnown RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 LCORLQ8N3X6 602 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MAGEB6Q8N7X4 407 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MIGA1Q8NAN2 632 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 SLC16A11Q8NCK7 471 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 WDR48Q8TAF3 677 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 MKL1Q969V6 931 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 NSUN4Q96CB9 384 aaKnown RBP4.26□□□□□ -1.73
SCFD1-204ENST00000463622 OR14A2Q96R54 314 aa4.26□□□□□ -1.73
SCFD1-204ENST00000463622 ADOQ96SZ5 270 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms