RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 APRTP07741 180 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 SMTNL2Q2TAL5 461 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 DEFB115Q30KQ5 88 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 GJB7Q6PEY0 223 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 FAM47EQ6ZV65 393 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ZNF677Q86XU0 584 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 GPR63Q9BZJ6 419 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 VTA1Q9NP79 307 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.43□□□□□ -0.26
NUP58-206ENST00000463407 CAPN15O75808 1086 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 INSRRP14616 1297 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ACO1P21399 889 aaKnown RBP13.43□□□□□ -0.26
NUP58-206ENST00000463407 LAMB3Q13751 1172 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 TBCCQ15814 346 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 P3H1Q32P28 736 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 FSCBQ5H9T9 825 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 TRAPPC11Q7Z392 1133 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ELMO2Q96JJ3 720 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 MLXIPLQ9NP71 852 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 SPECC1L-ADORA2AF8WAN1 911 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
NUP58-206ENST00000463407 FGFR4P22455 802 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 NAB2Q15742 525 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 LZICQ8WZA0 190 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ARHGEF26Q96DR7 871 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 SRPK1Q96SB4 655 aaKnown RBP13.43□□□□□ -0.26
NUP58-206ENST00000463407 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
NUP58-206ENST00000463407 SSU72P8A0A1W2PR75 194 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 M0QYT0 321 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 POMCP01189 267 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 MUTP22033 750 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 PPIL2Q13356 520 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 PDK1Q15118 436 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 DDX4Q9NQI0 724 aaKnown RBP13.43□□□□□ -0.26
NUP58-206ENST00000463407 ARHGAP10A1A4S6 786 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 SYDE1Q6ZW31 735 aaPredicted RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 CARNMT1Q8N4J0 409 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 PHF2O75151 1096 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 SPAG7O75391 227 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 SLC2A3P11169 496 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 RAP1GAPP47736 663 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 RPL10AP62906 217 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 FSCN1Q16658 493 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 APOBEC3HQ6NTF7 200 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 ARMC6Q6NXE6 501 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 C1orf131Q8NDD1 294 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 IPMKQ8NFU5 416 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 UCMAQ8WVF2 138 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 CCDC124Q96CT7 223 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 UPF3AQ9H1J1 476 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 RAB6BQ9NRW1 208 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 SLC25A13Q9UJS0 675 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 F5H5T6 163 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 CKMP06732 381 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 VIL1P09327 827 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 GFAPP14136 432 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 KCNA2P16389 499 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 GYS2P54840 703 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 PDCLQ13371 301 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 TEKT4Q8WW24 435 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 ARHGEF38Q9NXL2 777 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 TRIM33Q9UPN9 1127 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 MYL4P12829 197 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 KLHDC7AQ5VTJ3 777 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 MIB1Q86YT6 1006 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 PTPRN2Q92932 1015 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 EML4Q9HC35 981 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 SNTG2Q9NY99 539 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 SNX12Q9UMY4 172 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 RRP15Q9Y3B9 282 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 MGEA5O60502 916 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 TGFB3P10600 412 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 FXR1P51114 621 aaKnown RBP eCLIP13.42□□□□□ -0.26
NUP58-206ENST00000463407 OAZ1P54368 228 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 WDR24Q96S15 920 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 TRPM5Q9NZQ8 1165 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 SENP1Q9P0U3 644 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 CPSF2Q9P2I0 782 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 KANSL3Q9P2N6 904 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 XPO7Q9UIA9 1087 aaKnown RBP13.42□□□□□ -0.26
NUP58-206ENST00000463407 DISP2A7MBM2 1401 aa13.42□□□□□ -0.26
NUP58-206ENST00000463407 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 INPP1P49441 399 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 PPP2R2AP63151 447 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 BTG3Q14201 252 aaPredicted RBP13.41□□□□□ -0.26
NUP58-206ENST00000463407 ZNF280DQ6N043 979 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 SPATA4Q8NEY3 305 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 SLC26A7Q8TE54 656 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 RPRD1AQ96P16 312 aaPredicted RBP13.41□□□□□ -0.26
NUP58-206ENST00000463407 PPP1R2P1Q96PQ5 205 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 FAM96AQ9H5X1 160 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 DDIT4Q9NX09 232 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms