RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PTPN20Q4JDL3 420 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 SLC27A1Q6PCB7 646 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 TMEM35BQ8NCS4 154 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 FEZF2Q8TBJ5 459 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 C18orf25Q96B23 403 aaPredicted RBP13.6□□□□□ -0.23
VAPB-203ENST00000463370 MCEEQ96PE7 176 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 AP5M1Q9H0R1 490 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 VRTNQ9H8Y1 702 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 PARVAQ9NVD7 372 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 GABRQQ9UN88 632 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 TLL2Q9Y6L7 1015 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 PHF2O75151 1096 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 EIF4BP23588 611 aaKnown RBP13.6□□□□□ -0.23
VAPB-203ENST00000463370 SNX17Q15036 470 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 SEC14L1Q92503 715 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 APOL6Q9BWW8 343 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 MRPL47Q9HD33 250 aaKnown RBP13.6□□□□□ -0.23
VAPB-203ENST00000463370 KLHL11Q9NVR0 708 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 VPS18Q9P253 973 aa13.6□□□□□ -0.23
VAPB-203ENST00000463370 GOLGA6L10A0A0M3HER8 536 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 GOLGA6BA6NDN3 693 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 TMEM191CA6NGB0 347 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 ATICP31939 592 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 GJC1P36383 396 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 PTGIRP43119 386 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 KCNJ1P48048 391 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 INHBEP58166 350 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 GABPB1Q06547 395 aaPredicted RBP13.59□□□□□ -0.23
VAPB-203ENST00000463370 TRIM32Q13049 653 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 DCAF4L1Q3SXM0 396 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 ATP13A4Q4VNC1 1196 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 JAMLQ86YT9 394 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 PIK3R5Q8WYR1 880 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
VAPB-203ENST00000463370 SNX27Q96L92 541 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 ITGA11Q9UKX5 1188 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
VAPB-203ENST00000463370 PIN4Q9Y237 131 aaKnown RBP13.59□□□□□ -0.23
VAPB-203ENST00000463370 SCINQ9Y6U3 715 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 F8VP50 259 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 C6orf222P0C671 652 aaPredicted RBP13.59□□□□□ -0.23
VAPB-203ENST00000463370 SLC1A1P43005 524 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 RBP5P82980 135 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 PTPN11Q06124 597 aaPredicted RBP13.59□□□□□ -0.23
VAPB-203ENST00000463370 NNTQ13423 1086 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 KYAT1Q16773 422 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 NOTUMQ6P988 496 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 ERICH1Q86X53 443 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 TRIB2Q92519 343 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 TMEM176AQ96HP8 235 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 CPXM1Q96SM3 734 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 KLK14Q9P0G3 267 aa13.59□□□□□ -0.23
VAPB-203ENST00000463370 TRPM7Q96QT4 1865 aa13.58□□□□□ -0.23
VAPB-203ENST00000463370 C17orf102A2RUQ5 167 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 RNF40O75150 1001 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 RECQL4O94761 1208 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 PGK1P00558 417 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 CALB1P05937 261 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 CYP3A5P20815 502 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 NDST1P52848 882 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 YWHAEP62258 255 aaKnown RBP13.58□□□□□ -0.24
VAPB-203ENST00000463370 GPS2Q13227 327 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 CUL1Q13616 776 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 TXNRD3NBQ6F5E7 133 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 DNAJC24Q6P3W2 148 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 CCDC137Q6PK04 289 aaKnown RBP13.58□□□□□ -0.24
VAPB-203ENST00000463370 ATG4AQ8WYN0 398 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 HEMGNQ9BXL5 484 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 UTP11Q9Y3A2 253 aaKnown RBP13.58□□□□□ -0.24
VAPB-203ENST00000463370 NME7Q9Y5B8 376 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 GOLGA8SH3BPF8 625 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 MICAL2O94851 1124 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 PAEPP09466 180 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 AKR1A1P14550 325 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 HOXC8P31273 242 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
VAPB-203ENST00000463370 PSMC4P43686 418 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 ZBTB6Q15916 424 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 CYP1B1Q16678 543 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 UBXN11Q5T124 520 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 DUPD1Q68J44 220 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 C12orf29Q8N999 325 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 FAM71BQ8TC56 605 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 ZIM3Q96PE6 472 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 ERP44Q9BS26 406 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 ZNF518BQ9C0D4 1074 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 ACBD3Q9H3P7 528 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 CHST7Q9NS84 486 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 PTPN22Q9Y2R2 807 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 Q9Y3F1 56 aa13.58□□□□□ -0.24
VAPB-203ENST00000463370 FSCN2O14926 492 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 HCRTO43612 131 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms