RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SP4Q02446 784 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 EHHADHQ08426 723 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 KCNA10Q16322 511 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 SFMBT2Q5VUG0 894 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 MAGEB18Q96M61 343 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 TEKT3Q9BXF9 490 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 SAR1AQ9NR31 198 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZDHHC18Q9NUE0 388 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 CEP72Q9P209 647 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 TCP11X1B4DZS4 312 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 KRIT1O00522 736 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 CABYRO75952 493 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 CDK7P50613 346 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 PMS1P54277 932 aaKnown RBP12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 RAB15P59190 212 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 RPL26P61254 145 aaKnown RBP12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 CBX3Q13185 183 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZNF174Q15697 407 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 HSDL1Q3SXM5 330 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 DUPD1Q68J44 220 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 SYCE1Q8N0S2 351 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 AZI2Q9H6S1 392 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 SUCLA2Q9P2R7 463 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 SSX2IPQ9Y2D8 614 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 USH1CQ9Y6N9 552 aa12.15□□□□□ -0.46
TRAPPC3-205ENST00000462715 A0A0A6YYK5 440 aaPredicted RBP12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 DDX39AO00148 427 aaKnown RBP12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 LAD1O00515 517 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 KCNK3O14649 394 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 MAPK13O15264 365 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 ASGR1P07306 291 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 MYL3P08590 195 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 MARK3P27448 753 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 KLK7P49862 253 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 ACLYP53396 1101 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 POLGP54098 1239 aaPredicted RBP12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLC34A1Q06495 639 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCSAPQ6IQ19 270 aaPredicted RBP12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 RINLQ6ZS11 566 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 RRAGAQ7L523 313 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 NECAB2Q7Z6G3 386 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 PHC3Q8NDX5 983 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 PIP4K2CQ8TBX8 421 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 SEPT1Q8WYJ6 367 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 GPR20Q99678 358 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 DDX23Q9BUQ8 820 aaKnown RBP12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 DNAJB4Q9UDY4 337 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 TMED5Q9Y3A6 229 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 STARD13Q9Y3M8 1113 aa12.15□□□□□ -0.47
TRAPPC3-205ENST00000462715 SMAPO00193 183 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 MAGEB2O15479 319 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 DHX15O43143 795 aaKnown RBP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 PSMD10O75832 226 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 FTCDO95954 541 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 HOXD8P13378 290 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 PTPN4P29074 926 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 USP46P62068 366 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 GFPT1Q06210 699 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCDC6Q16204 474 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 SNX30Q5VWJ9 437 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLFN11Q7Z7L1 901 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 DDX42Q86XP3 938 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 UCMAQ8WVF2 138 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 SERPINB12Q96P63 405 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 UIMC1Q96RL1 719 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 MTG1Q9BT17 334 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 PHACTR1Q9C0D0 580 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 BHMT2Q9H2M3 363 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 BCAS3Q9H6U6 928 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 TIMMDC1Q9NPL8 285 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 FGFR1OP2Q9NVK5 253 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 KBTBD4Q9NVX7 518 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 STX18Q9P2W9 335 aaKnown RBP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 BARX2Q9UMQ3 279 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 ATP8A1Q9Y2Q0 1164 aa12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 NOC2LQ9Y3T9 749 aaKnown RBP12.14□□□□□ -0.47
TRAPPC3-205ENST00000462715 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 MAP3K7O43318 606 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 OR52Z1P0C646 297 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 SFNP31947 248 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 CD97P48960 835 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 ACADVLP49748 655 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 JAK3P52333 1124 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 BPIFB4P59827 614 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 ACTR2P61160 394 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 RNASELQ05823 741 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 WDR60Q8WVS4 1066 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 SCG3Q8WXD2 468 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 HAS1Q92839 578 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 ERP44Q9BS26 406 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 KATNAL1Q9BW62 490 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 YIPF2Q9BWQ6 316 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 C11orf49Q9H6J7 331 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 DISC1Q9NRI5 854 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms