RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 SEPT5Q99719 369 aaPredicted RBP15.05■□□□□ -0
USP4-206ENST00000461553 FOXQ1Q9C009 403 aa15.05■□□□□ -0
USP4-206ENST00000461553 CRISPLD1Q9H336 500 aa15.05■□□□□ -0
USP4-206ENST00000461553 PCIF1Q9H4Z3 704 aa15.05■□□□□ -0
USP4-206ENST00000461553 HSFX1Q9UBD0 423 aa15.05■□□□□ -0
USP4-206ENST00000461553 ITGA11Q9UKX5 1188 aa15.05■□□□□ -0
USP4-206ENST00000461553 SIT1Q9Y3P8 196 aa15.05■□□□□ -0
USP4-206ENST00000461553 UBE4BO95155 1302 aa15.05■□□□□ -0
USP4-206ENST00000461553 KIF26AQ9ULI4 1882 aaPredicted RBP15.05■□□□□ -0
USP4-206ENST00000461553 KPNA7A9QM74 516 aa15.04■□□□□ -0
USP4-206ENST00000461553 DCNP07585 359 aaKnown RBP15.04■□□□□ -0
USP4-206ENST00000461553 TMEM191BP0C7N4 346 aa15.04■□□□□ -0
USP4-206ENST00000461553 FCARP24071 287 aa15.04■□□□□ -0
USP4-206ENST00000461553 NBL1P41271 181 aa15.04■□□□□ -0
USP4-206ENST00000461553 WNT7BP56706 349 aa15.04■□□□□ -0
USP4-206ENST00000461553 GRM2Q14416 872 aa15.04■□□□□ -0
USP4-206ENST00000461553 UBXN2BQ14CS0 331 aa15.04■□□□□ -0
USP4-206ENST00000461553 TEAD2Q15562 447 aa15.04■□□□□ -0
USP4-206ENST00000461553 MGAT5BQ3V5L5 792 aa15.04■□□□□ -0
USP4-206ENST00000461553 FAM78AQ5JUQ0 283 aa15.04■□□□□ -0
USP4-206ENST00000461553 FAM26FQ5R3K3 315 aa15.04■□□□□ -0
USP4-206ENST00000461553 WSCD1Q658N2 575 aa15.04■□□□□ -0
USP4-206ENST00000461553 ATL3Q6DD88 541 aa15.04■□□□□ -0
USP4-206ENST00000461553 TANGO2Q6ICL3 276 aa15.04■□□□□ -0
USP4-206ENST00000461553 TTC9BQ8N6N2 239 aa15.04■□□□□ -0
USP4-206ENST00000461553 ZSWIM2Q8NEG5 633 aa15.04■□□□□ -0
USP4-206ENST00000461553 SHKBP1Q8TBC3 707 aa15.04■□□□□ -0
USP4-206ENST00000461553 FAM200AQ8TCP9 573 aa15.04■□□□□ -0
USP4-206ENST00000461553 C2orf15Q8WU43 125 aaKnown RBP15.04■□□□□ -0
USP4-206ENST00000461553 DNASE1L2Q92874 299 aa15.04■□□□□ -0
USP4-206ENST00000461553 SMARCD2Q92925 531 aa15.04■□□□□ -0
USP4-206ENST00000461553 GPR88Q9GZN0 384 aa15.04■□□□□ -0
USP4-206ENST00000461553 ZCWPW1Q9H0M4 648 aa15.04■□□□□ -0
USP4-206ENST00000461553 DNAJC25Q9H1X3 360 aa15.04■□□□□ -0
USP4-206ENST00000461553 CFAP45Q9UL16 551 aa15.04■□□□□ -0
USP4-206ENST00000461553 SLC27A5Q9Y2P5 690 aa15.04■□□□□ -0
USP4-206ENST00000461553 R3HCC1Q9Y3T6 440 aaKnown RBP15.04■□□□□ -0
USP4-206ENST00000461553 ASB3Q9Y575 518 aa15.04■□□□□ -0
USP4-206ENST00000461553 PTPRZ1P23471 2315 aaPredicted RBP15.03■□□□□ -0
USP4-206ENST00000461553 CFAP54Q96N23 3096 aa15.03■□□□□ -0
USP4-206ENST00000461553 A0A1W2PRU2 124 aa15.03■□□□□ -0
USP4-206ENST00000461553 KANSL1LA0AUZ9 987 aa15.03■□□□□ -0
USP4-206ENST00000461553 PROB1E7EW31 1015 aa15.03■□□□□ -0
USP4-206ENST00000461553 POLR2DO15514 142 aaKnown RBP15.03■□□□□ -0
USP4-206ENST00000461553 FGF19O95750 216 aa15.03■□□□□ -0
USP4-206ENST00000461553 KRT19P08727 400 aa15.03■□□□□ -0
USP4-206ENST00000461553 GJA1P17302 382 aa15.03■□□□□ -0
USP4-206ENST00000461553 TUFMP49411 452 aaKnown RBP15.03■□□□□ -0
USP4-206ENST00000461553 TSPY1Q01534 308 aa15.03■□□□□ -0
USP4-206ENST00000461553 SMARCB1Q12824 385 aa15.03■□□□□ -0
USP4-206ENST00000461553 BFSP1Q12934 665 aa15.03■□□□□ -0
USP4-206ENST00000461553 SLC44A4Q53GD3 710 aa15.03■□□□□ -0
USP4-206ENST00000461553 CNNM4Q6P4Q7 775 aa15.03■□□□□ -0
USP4-206ENST00000461553 TPRG1Q6ZUI0 275 aa15.03■□□□□ -0
USP4-206ENST00000461553 TMC8Q8IU68 726 aa15.03■□□□□ -0
USP4-206ENST00000461553 DCP1BQ8IZD4 617 aaKnown RBP15.03■□□□□ -0
USP4-206ENST00000461553 LRRC52Q8N7C0 313 aa15.03■□□□□ -0
USP4-206ENST00000461553 C1orf127Q8N9H9 656 aa15.03■□□□□ -0
USP4-206ENST00000461553 SPRYD3Q8NCJ5 442 aa15.03■□□□□ -0
USP4-206ENST00000461553 ZSCAN18Q8TBC5 510 aaPredicted RBP15.03■□□□□ -0
USP4-206ENST00000461553 SPPL2BQ8TCT7 592 aa15.03■□□□□ -0
USP4-206ENST00000461553 DEPDC1BQ8WUY9 529 aa15.03■□□□□ -0
USP4-206ENST00000461553 HPS3Q969F9 1004 aa15.03■□□□□ -0
USP4-206ENST00000461553 PSMG2Q969U7 264 aa15.03■□□□□ -0
USP4-206ENST00000461553 ANKRD36BP1Q96IX9 119 aa15.03■□□□□ -0
USP4-206ENST00000461553 GCNAQ96QF7 691 aa15.03■□□□□ -0
USP4-206ENST00000461553 PLA2G2FQ9BZM2 168 aa15.03■□□□□ -0
USP4-206ENST00000461553 MTMR12Q9C0I1 747 aa15.03■□□□□ -0
USP4-206ENST00000461553 BRD9Q9H8M2 597 aa15.03■□□□□ -0
USP4-206ENST00000461553 AGAP1Q9UPQ3 857 aa15.03■□□□□ -0
USP4-206ENST00000461553 GREB1Q4ZG55 1949 aa15.03■□□□□ -0
USP4-206ENST00000461553 HELZP42694 1942 aaKnown RBP15.02■□□□□ -0
USP4-206ENST00000461553 NRG2O14511 850 aaPredicted RBP15.02■□□□□ -0
USP4-206ENST00000461553 HUS1O60921 280 aa15.02■□□□□ -0
USP4-206ENST00000461553 MOSPD3O75425 235 aa15.02■□□□□ -0
USP4-206ENST00000461553 SOAT2O75908 522 aa15.02■□□□□ -0
USP4-206ENST00000461553 PKP1Q13835 747 aa15.02■□□□□ -0
USP4-206ENST00000461553 SURF1Q15526 300 aa15.02■□□□□ -0
USP4-206ENST00000461553 TAF12Q16514 161 aa15.02■□□□□ -0
USP4-206ENST00000461553 POTEHQ6S545 545 aa15.02■□□□□ -0
USP4-206ENST00000461553 UNC13DQ70J99 1090 aa15.02■□□□□ -0
USP4-206ENST00000461553 CEP57L1Q8IYX8 460 aa15.02■□□□□ -0
USP4-206ENST00000461553 GLIS3Q8NEA6 775 aa15.02■□□□□ -0
USP4-206ENST00000461553 E2F7Q96AV8 911 aa15.02■□□□□ -0
USP4-206ENST00000461553 C7orf25Q9BPX7 421 aa15.02■□□□□ -0
USP4-206ENST00000461553 LPIN3Q9BQK8 851 aa15.02■□□□□ -0
USP4-206ENST00000461553 DDX23Q9BUQ8 820 aaKnown RBP15.02■□□□□ -0
USP4-206ENST00000461553 TRMT61BQ9BVS5 477 aaKnown RBP15.02■□□□□ -0
USP4-206ENST00000461553 BCO2Q9BYV7 579 aa15.02■□□□□ -0
USP4-206ENST00000461553 PDE11AQ9HCR9 933 aa15.02■□□□□ -0
USP4-206ENST00000461553 LTB4R2Q9NPC1 389 aa15.02■□□□□ -0
USP4-206ENST00000461553 ABI2Q9NYB9 513 aaPredicted RBP15.02■□□□□ -0
USP4-206ENST00000461553 HSPBP1Q9NZL4 362 aa15.02■□□□□ -0
USP4-206ENST00000461553 PCDHA7Q9UN72 937 aa15.02■□□□□ -0
USP4-206ENST00000461553 ANAPC1Q9H1A4 1944 aa15.02□□□□□ -0.01
USP4-206ENST00000461553 ZNF233A6NK53 670 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 TNNC2P02585 160 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 PSMC3P17980 439 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 ATF6P18850 670 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 GABRR2P28476 465 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms