RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 KPNA7A9QM74 516 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 ZNF197O14709 1029 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 CYP11A1P05108 521 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 RBP5P82980 135 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 GPR17Q13304 367 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 SLC5A9Q2M3M2 681 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 ASTLQ6HA08 431 aaPredicted RBP16.57■□□□□ 0.24
VARS-219ENST00000461328 PDZD4Q76G19 769 aaPredicted RBP16.57■□□□□ 0.24
VARS-219ENST00000461328 PRSS33Q8NF86 280 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 CCDC127Q96BQ5 260 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 MCRS1Q96EZ8 462 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 ZNF512Q96ME7 567 aaPredicted RBP16.57■□□□□ 0.24
VARS-219ENST00000461328 AVENQ9NQS1 362 aaPredicted RBP16.57■□□□□ 0.24
VARS-219ENST00000461328 INTS13Q9NVM9 706 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 WNT16Q9UBV4 365 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 YIPF1Q9Y548 306 aa16.57■□□□□ 0.24
VARS-219ENST00000461328 MUC6Q6W4X9 2439 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 RHOBTB3O94955 611 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 CLSTN1O94985 981 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 CEBPBP17676 345 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 TNNI1P19237 187 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 RFX1P22670 979 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 PTPN5P54829 565 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 NHLH1Q02575 133 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 CYP24A1Q07973 514 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 DUSP4Q13115 394 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 PLD1Q13393 1074 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 DUOXA2Q1HG44 320 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 CYP4A22Q5TCH4 519 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 WSCD1Q658N2 575 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 WDR49Q8IV35 697 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 C12orf56Q8IXR9 622 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 FMR1NBQ8N0W7 255 aaPredicted RBP16.56■□□□□ 0.24
VARS-219ENST00000461328 THEM5Q8N1Q8 247 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 OR5B17Q8NGF7 314 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 GPR152Q8TDT2 470 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 RPP25Q9BUL9 199 aaKnown RBP16.56■□□□□ 0.24
VARS-219ENST00000461328 GDE1Q9NZC3 331 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
VARS-219ENST00000461328 CA14Q9ULX7 337 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 ZDBF2Q9HCK1 2354 aa16.56■□□□□ 0.24
VARS-219ENST00000461328 PTPRJQ12913 1337 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 MTMR11A4FU01 709 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 STK25O00506 426 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 CALUO43852 315 aaPredicted RBP16.55■□□□□ 0.24
VARS-219ENST00000461328 HUS1O60921 280 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 PRPF40AO75400 957 aaKnown RBP16.55■□□□□ 0.24
VARS-219ENST00000461328 ALDH1A3P47895 512 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 CLCN5P51795 746 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 MYO1EQ12965 1108 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 PNOCQ13519 176 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 PSMD6Q15008 389 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 PRSS36Q5K4E3 855 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 CWF19L1Q69YN2 538 aaKnown RBP16.55■□□□□ 0.24
VARS-219ENST00000461328 HS6ST3Q8IZP7 471 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 TMEM105Q8N8V8 129 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 OR10T2Q8NGX3 314 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 CGRRF1Q99675 332 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 KXD1Q9BQD3 176 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 CRISPLD1Q9H336 500 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 RMND1Q9NWS8 449 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 CEP72Q9P209 647 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 MAPK8IP1Q9UQF2 711 aa16.55■□□□□ 0.24
VARS-219ENST00000461328 TSC2P49815 1807 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 VNN2O95498 520 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 NR3C1P04150 777 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 MYL4P12829 197 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 NUBP1P53384 320 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 EPHB3P54753 998 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 KCNB1Q14721 858 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 SLC39A12Q504Y0 691 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 CENPPQ6IPU0 288 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 ATAD1Q8NBU5 361 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 LEMD2Q8NC56 503 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 TCEAL4Q96EI5 215 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 BORCS6Q96GS4 357 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 SIX4Q9UIU6 781 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 SLC27A5Q9Y2P5 690 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
VARS-219ENST00000461328 SCN1AP35498 2009 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 KRBA1A5PL33 1030 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 PDXKO00764 312 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
VARS-219ENST00000461328 PHACTR2O75167 634 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 MICAL2O94851 1124 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 SMC2O95347 1197 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 NPR3P17342 541 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 CCR2P41597 374 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 GPC5P78333 572 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 TTC9BQ8N6N2 239 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 HPDLQ96IR7 371 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 RTP3Q9BQQ7 232 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms