RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ADALQ6DHV7 355 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 ARMCX5Q6P1M9 558 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 USP49Q70CQ1 688 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 DNAJB7Q7Z6W7 309 aaPredicted RBP15.92■□□□□ 0.14
SMPD4-216ENST00000461187 PSMG2Q969U7 264 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 EPSTI1Q96J88 318 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 MKNK1Q9BUB5 465 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 EPC1Q9H2F5 836 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 IKZF4Q9H2S9 585 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 ASB7Q9H672 318 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 LMAN1LQ9HAT1 526 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 HSFX1Q9UBD0 423 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 C2CD2Q9Y426 696 aa15.92■□□□□ 0.14
SMPD4-216ENST00000461187 CHADO15335 359 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 MLLT6P55198 1093 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-216ENST00000461187 FCHO2Q0JRZ9 810 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 SLFN12LQ6IEE8 588 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 CRELD2Q6UXH1 353 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-216ENST00000461187 ZNF720Q7Z2F6 126 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 GPIHBP1Q8IV16 184 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 ARID3BQ8IVW6 561 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-216ENST00000461187 LRRC3BQ96PB8 259 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 IER2Q9BTL4 223 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 FAM126AQ9BYI3 521 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-216ENST00000461187 ZCWPW1Q9H0M4 648 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 UPF2Q9HAU5 1272 aaKnown RBP15.91■□□□□ 0.14
SMPD4-216ENST00000461187 AGO2Q9UKV8 859 aaKnown RBP15.91■□□□□ 0.14
SMPD4-216ENST00000461187 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
SMPD4-216ENST00000461187 PPP1R37O75864 691 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 CHRNB1P11230 501 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 CCNE1P24864 410 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 GABRR2P28476 465 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 POU5F1Q01860 360 aaKnown RBP15.9■□□□□ 0.14
SMPD4-216ENST00000461187 PTPAQ15257 358 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 SLC39A12Q504Y0 691 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 DYMQ7RTS9 669 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 ITIH5Q86UX2 942 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 SFR1Q86XK3 245 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 YAF2Q8IY57 180 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 KRI1Q8N9T8 703 aaKnown RBP15.9■□□□□ 0.14
SMPD4-216ENST00000461187 CSGALNACT1Q8TDX6 532 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 STRA6Q9BX79 667 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 ATXN3LQ9H3M9 355 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 DPP3Q9NY33 737 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 NCDNQ9UBB6 729 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 DSEQ9UL01 958 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 SMG5Q9UPR3 1016 aaKnown RBP15.9■□□□□ 0.14
SMPD4-216ENST00000461187 MYOFQ9NZM1 2061 aa15.9■□□□□ 0.14
SMPD4-216ENST00000461187 MYH10P35580 1976 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 VPS37CA5D8V6 355 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-216ENST00000461187 CYB561D2O14569 222 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 FGF19O95750 216 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 ATF6P18850 670 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 ADSSP30520 456 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 TAF6P49848 677 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 CDR1P51861 262 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 CUL4AQ13619 759 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 GAS6Q14393 721 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 PUM1Q14671 1186 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMPD4-216ENST00000461187 GPR158Q5T848 1215 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 LRRTM3Q86VH5 581 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 EFCAB13Q8IY85 973 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 HVCN1Q96D96 273 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 MSANTD3Q96H12 275 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 SEPT5Q99719 369 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-216ENST00000461187 LPIN3Q9BQK8 851 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 PYM1Q9BRP8 204 aaKnown RBP15.89■□□□□ 0.13
SMPD4-216ENST00000461187 IL21Q9HBE4 155 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 DLL3Q9NYJ7 618 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 STK17AQ9UEE5 414 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 FBXO2Q9UK22 296 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-216ENST00000461187 NCOR2Q9Y618 2525 aa15.89■□□□□ 0.13
SMPD4-216ENST00000461187 SLC38A8A6NNN8 435 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 CENPBP07199 599 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-216ENST00000461187 WEE1P30291 646 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 SOX9P48436 509 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 TUFMP49411 452 aaKnown RBP15.88■□□□□ 0.13
SMPD4-216ENST00000461187 CCR3P51677 355 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 NRLP54845 237 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 KCNA1Q09470 495 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 MGAT5BQ3V5L5 792 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 ARHGAP15Q53QZ3 475 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 WDR44Q5JSH3 913 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 WSCD1Q658N2 575 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 DGLUCYQ7Z3D6 616 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 METTL23Q86XA0 190 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 POMGNT1Q8WZA1 660 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 DNAJC19Q96DA6 116 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 C8orf33Q9H7E9 229 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-216ENST00000461187 OBP2AQ9NY56 170 aa15.88■□□□□ 0.13
SMPD4-216ENST00000461187 SRPRBQ9Y5M8 271 aaKnown RBP15.88■□□□□ 0.13
SMPD4-216ENST00000461187 MED19A0JLT2 244 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-216ENST00000461187 MYBPHLA2RUH7 354 aa15.87■□□□□ 0.13
SMPD4-216ENST00000461187 MYMKA6NI61 221 aa15.87■□□□□ 0.13
SMPD4-216ENST00000461187 DPYSL4O14531 572 aa15.87■□□□□ 0.13
SMPD4-216ENST00000461187 IL18RAPO95256 599 aa15.87■□□□□ 0.13
SMPD4-216ENST00000461187 PRAMEF12O95522 483 aa15.87■□□□□ 0.13
SMPD4-216ENST00000461187 CTHP32929 405 aa15.87■□□□□ 0.13
SMPD4-216ENST00000461187 KPNA1P52294 538 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-216ENST00000461187 WNT7BP56706 349 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms