RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 LIMS2Q7Z4I7 341 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 NECAB2Q7Z6G3 386 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 SLC47A2Q86VL8 602 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 RHOT2Q8IXI1 618 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 RPUSD2Q8IZ73 545 aaKnown RBP9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 TOP6BLQ8N6T0 577 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 OLIG1Q8TAK6 271 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 URGCPQ8TCY9 931 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 VCPIP1Q96JH7 1222 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 FAM84AQ96KN4 292 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 TUBGCP4Q9UGJ1 667 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 LCMT1Q9UIC8 334 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 CENPFP49454 3210 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 NCANO14594 1321 aa9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 KIAA0100Q14667 2235 aaKnown RBP9.51□□□□□ -0.89
CDC42EP3-204ENST00000457889 KPNA7A9QM74 516 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 HUS1O60921 280 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 NBNO60934 754 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 KIF4AO95239 1232 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 MYCP01106 439 aaPredicted RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 CYP1A1P04798 512 aaPredicted RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 PFKMP08237 780 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 CLTBP09497 229 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 NSFP46459 744 aaKnown RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 HADHBP55084 474 aaKnown RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 FMO1Q01740 532 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 CENPCQ03188 943 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 TUSC3Q13454 348 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 CLEC16AQ2KHT3 1053 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 TRIM60Q495X7 471 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 GLRA4Q5JXX5 417 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 TMEM86AQ8N2M4 240 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 TMEM35BQ8NCS4 154 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 MSANTD4Q8NCY6 345 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 GSTCDQ8NEC7 633 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 LNX1Q8TBB1 728 aaPredicted RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 SLC20A1Q8WUM9 679 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 RFFLQ8WZ73 363 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 C18orf25Q96B23 403 aaPredicted RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 ZFP42Q96MM3 310 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 MMS19Q96T76 1030 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 GAD1Q99259 594 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 NT5C1AQ9BXI3 368 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 MRPL9Q9BYD2 267 aaKnown RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 LACRTQ9GZZ8 138 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 MIS12Q9H081 205 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 LHX5Q9H2C1 402 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 PDCL3Q9H2J4 239 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 SMYD3Q9H7B4 428 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 SEPT11Q9NVA2 429 aaKnown RBP9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 KLK14Q9P0G3 267 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 DSEQ9UL01 958 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 GUCA1BQ9UMX6 200 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 TRIP11Q15643 1979 aa9.5□□□□□ -0.89
CDC42EP3-204ENST00000457889 CTAGE9A4FU28 777 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 BHMG1C9JSJ3 638 aaPredicted RBP9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 TMEM189-UBE2V1I3L0A0 370 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 PODXLO00592 558 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 KIAA0355O15063 1070 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 THAP12O43422 761 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 MTA2O94776 668 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 MMEP08473 750 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 WEE2P0C1S8 567 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 VDRP11473 427 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 CHRNB2P17787 502 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 CD58P19256 250 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 CASQ1P31415 396 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 CDH5P33151 784 aaPredicted RBP9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 AARSP49588 968 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 GUCY2FP51841 1108 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 SNX16P57768 344 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 LILRA4P59901 499 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 LIN9Q5TKA1 542 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 ACAD10Q6JQN1 1059 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 SCARA5Q6ZMJ2 495 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 SYCE1Q8N0S2 351 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 APPL2Q8NEU8 664 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 ZNF606Q8WXB4 792 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 TMEM176AQ96HP8 235 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 TNIP3Q96KP6 325 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 AVENQ9NQS1 362 aaPredicted RBP9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 TMEM39AQ9NV64 488 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 UVRAGQ9P2Y5 699 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 DNAI1Q9UI46 699 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 POLIQ9UNA4 740 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 JRKLQ9Y4A0 524 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 PCDHGC5Q9Y5F6 944 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 SNX9Q9Y5X1 595 aa9.49□□□□□ -0.89
CDC42EP3-204ENST00000457889 DNAH12Q6ZR08 3092 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 MACROD2A1Z1Q3 448 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 FTLP02792 175 aaPredicted RBP9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 CALB1P05937 261 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SETSIPP0DME0 302 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 UNGP13051 313 aaPredicted RBP9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 WARSP23381 471 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms