RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 PARP10Q53GL7 1025 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 NAIF1Q69YI7 327 aaPredicted RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 UBE3BQ7Z3V4 1068 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 NECAB2Q7Z6G3 386 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 NBPF5PQ86XG9 351 aaPredicted RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 SPATS2Q86XZ4 545 aaKnown RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 NOSTRINQ8IVI9 506 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 CBARPQ8N350 705 aaPredicted RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 CELF1Q92879 486 aaKnown RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 BOCQ9BWV1 1114 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 MS4A5Q9H3V2 200 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 EMC7Q9NPA0 242 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 CWC25Q9NXE8 425 aaPredicted RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 MAGEL2Q9UJ55 1249 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 DDX60Q8IY21 1712 aaKnown RBP4.79□□□□□ -1.64
UBDP1-202ENST00000457888 C10orf71Q711Q0 1435 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 SNED1Q8TER0 1413 aa4.79□□□□□ -1.64
UBDP1-202ENST00000457888 LAMB2P55268 1798 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 ANKRD36CQ5JPF3 1778 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 N4BP2Q86UW6 1770 aaPredicted RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 SH3TC1Q8TE82 1336 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 CDHR2Q9BYE9 1310 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 PCNTO95613 3336 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 TNRC6CQ9HCJ0 1690 aaKnown RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 PNMA6EA0A0J9YXQ4 647 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 SLC12A8A0AV02 714 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 LCHNA4D1U4 455 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 DVL2O14641 736 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 AKAP10O43572 662 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 TSPAN6O43657 245 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 DDX58O95786 925 aaKnown RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 ZBTB48P10074 688 aaPredicted RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 SDHAP31040 664 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 IRX6P78412 446 aaPredicted RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 ARHGAP44Q17R89 818 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 HSP90AB3PQ58FF7 597 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 LMBR1LQ6UX01 489 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 PPP1R42Q7Z4L9 355 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 EXOC6Q8TAG9 804 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 KLHDC4Q8TBB5 520 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 CPT1CQ8TCG5 803 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 HOOK2Q96ED9 719 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 ZNF512Q96ME7 567 aaPredicted RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 RTFDC1Q9BY42 306 aaPredicted RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 PUS3Q9BZE2 481 aaKnown RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 API5Q9BZZ5 524 aaKnown RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 R3HDMLQ9H3Y0 253 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 BICC1Q9H694 974 aaKnown RBP4.78□□□□□ -1.64
UBDP1-202ENST00000457888 GREM2Q9H772 168 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 OXSMQ9NWU1 459 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 SORCS3Q9UPU3 1222 aa4.78□□□□□ -1.64
UBDP1-202ENST00000457888 BRCA1P38398 1863 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 IPO8O15397 1037 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 PRPF3O43395 683 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 KRT37O76014 449 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 IGHDP01880 384 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 VSIG10L2P0DP72 767 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 ZFP36P26651 326 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 CCT4P50991 539 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 NEK2P51955 445 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 KPNA1P52294 538 aaPredicted RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 ATP8B2P98198 1209 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 IRF9Q00978 393 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 OCRLQ01968 901 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 MTX1Q13505 466 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 MVPQ14764 893 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 ABCB5Q2M3G0 1257 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 ATP13A4Q4VNC1 1196 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 KRT40Q6A162 431 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 ATG9AQ7Z3C6 839 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 C14orf80Q86SX3 495 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 C2CD5Q86YS7 1000 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 WDR75Q8IWA0 830 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 CNBD1Q8NA66 436 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 PLA2G15Q8NCC3 412 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 DLG3Q92796 817 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 NKD2Q969F2 451 aaPredicted RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 ARL8AQ96BM9 186 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 PUS7LQ9H0K6 701 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 RIPOR2Q9Y4F9 1068 aa4.77□□□□□ -1.65
UBDP1-202ENST00000457888 LRRFIP2Q9Y608 721 aaKnown RBP4.77□□□□□ -1.65
UBDP1-202ENST00000457888 KIF16BQ96L93 1317 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 H7C1D1 291 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 FZD9O00144 591 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 RECQL4O94761 1208 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 TOX4O94842 621 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 SCGB1D2O95969 90 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 COL11A2P13942 1736 aaPredicted RBP4.76□□□□□ -1.65
UBDP1-202ENST00000457888 IARSP41252 1262 aaKnown RBP4.76□□□□□ -1.65
UBDP1-202ENST00000457888 EPHB1P54762 984 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 ANTXR2P58335 489 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 ERVK-21P61565 698 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 RPS8P62241 208 aaKnown RBP4.76□□□□□ -1.65
UBDP1-202ENST00000457888 ALDH6A1Q02252 535 aaKnown RBP4.76□□□□□ -1.65
UBDP1-202ENST00000457888 CACNA1SQ13698 1873 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 PPP2R5AQ15172 486 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 GPR162Q16538 588 aa4.76□□□□□ -1.65
UBDP1-202ENST00000457888 INAVAQ3KP66 663 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms