RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 ARPP19P56211 112 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 ROR1Q01973 937 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 DLX2Q07687 328 aaPredicted RBP19.5■□□□□ 0.71
TRIM13-206ENST00000457662 CETN1Q12798 172 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 KCNH2Q12809 1159 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 CBWD6Q4V339 395 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 CBWD3Q5JTY5 395 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 CBWD5Q5RIA9 395 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 TPGS2Q68CL5 300 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 ADGRF2Q8IZF7 708 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 CLEC1BQ9P126 229 aa19.5■□□□□ 0.71
TRIM13-206ENST00000457662 GABRDO14764 452 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 TBX10O75333 385 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 AFPP02771 609 aaKnown RBP19.49■□□□□ 0.71
TRIM13-206ENST00000457662 KCNA5P22460 613 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 MTIF2P46199 727 aaKnown RBP19.49■□□□□ 0.71
TRIM13-206ENST00000457662 MYL7Q01449 175 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 ANO6Q4KMQ2 910 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 WDR44Q5JSH3 913 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 ANKRD54Q6NXT1 300 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 KREMEN2Q8NCW0 462 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 FAXDC2Q96IV6 333 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 ACBD6Q9BR61 282 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 FUCA2Q9BTY2 467 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 PRDM6Q9NQX0 595 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 SAMSN1Q9NSI8 373 aaKnown RBP19.49■□□□□ 0.71
TRIM13-206ENST00000457662 DDX43Q9NXZ2 648 aaKnown RBP19.49■□□□□ 0.71
TRIM13-206ENST00000457662 THEGQ9P2T0 379 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 MAFFQ9ULX9 164 aa19.49■□□□□ 0.71
TRIM13-206ENST00000457662 BARX2Q9UMQ3 279 aaPredicted RBP19.49■□□□□ 0.71
TRIM13-206ENST00000457662 WDR27A2RRH5 827 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 SPATA31D3P0C874 917 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 CPB1P15086 417 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 WARSP23381 471 aaKnown RBP19.48■□□□□ 0.71
TRIM13-206ENST00000457662 PCSK1P29120 753 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 MYL5Q02045 173 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 GPR17Q13304 367 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 AAK1Q2M2I8 961 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 ZSCAN23Q3MJ62 389 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 SPATA31D4Q6ZUB0 917 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 RTL10Q7L3V2 364 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 SEMA4DQ92854 862 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 MSLNLQ96KJ4 702 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 BPIFA3Q9BQP9 254 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 RTP3Q9BQQ7 232 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 PI4K2AQ9BTU6 479 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 MAN1C1Q9NR34 630 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 POLIQ9UNA4 740 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 ATF2P15336 505 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 ELF1P32519 619 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 GNL1P36915 607 aaPredicted RBP19.48■□□□□ 0.71
TRIM13-206ENST00000457662 NOP14P78316 857 aaKnown RBP19.48■□□□□ 0.71
TRIM13-206ENST00000457662 SMARCB1Q12824 385 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 UVSSAQ2YD98 709 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 DCP1BQ8IZD4 617 aaKnown RBP19.48■□□□□ 0.71
TRIM13-206ENST00000457662 OR10T2Q8NGX3 314 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 KBTBD7Q8WVZ9 684 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 ZCWPW1Q9H0M4 648 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 SNX25Q9H3E2 840 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 AFF4Q9UHB7 1163 aaKnown RBP19.48■□□□□ 0.71
TRIM13-206ENST00000457662 CD207Q9UJ71 328 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 FBXW11Q9UKB1 542 aa19.48■□□□□ 0.71
TRIM13-206ENST00000457662 KCNJ18B7U540 433 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 H3BQ06 376 aaPredicted RBP19.47■□□□□ 0.71
TRIM13-206ENST00000457662 EEF1GP26641 437 aaKnown RBP19.47■□□□□ 0.71
TRIM13-206ENST00000457662 TSPY1Q01534 308 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 KCNJ12Q14500 433 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 LEXMQ3ZCV2 418 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 LIN9Q5TKA1 542 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 SPOPLQ6IQ16 392 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 SYCE2Q6PIF2 218 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 CCDC149Q6ZUS6 474 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 OSTM1Q86WC4 334 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 OR6B3Q8NGW1 331 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 ATXN2LQ8WWM7 1075 aaKnown RBP19.47■□□□□ 0.71
TRIM13-206ENST00000457662 ELMO3Q96BJ8 720 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 MRPL45Q9BRJ2 306 aaKnown RBP19.47■□□□□ 0.71
TRIM13-206ENST00000457662 CYP3A43Q9HB55 503 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 APOBEC3GQ9HC16 384 aaKnown RBP19.47■□□□□ 0.71
TRIM13-206ENST00000457662 FANCLQ9NW38 375 aa19.47■□□□□ 0.71
TRIM13-206ENST00000457662 MTCL1Q9Y4B5 1905 aaKnown RBP19.46■□□□□ 0.71
TRIM13-206ENST00000457662 SMTNL1A8MU46 457 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 SLC34A2O95436 690 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 OR4Q2P0C623 313 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 PRKCSHP14314 528 aaPredicted RBP19.46■□□□□ 0.71
TRIM13-206ENST00000457662 ZNF165P49910 485 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 CDH8P55286 799 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 MAN2A1Q16706 1144 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 PUS10Q3MIT2 529 aaKnown RBP19.46■□□□□ 0.71
TRIM13-206ENST00000457662 HSP90AA4PQ58FG1 418 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 TCP11X2Q5H9J9 407 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 CDKAL1Q5VV42 579 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 TMEM209Q96SK2 561 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 TUBGCP2Q9BSJ2 902 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 NIF3L1Q9GZT8 377 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 SMYD3Q9H7B4 428 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 SFXN1Q9H9B4 322 aa19.46■□□□□ 0.71
TRIM13-206ENST00000457662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.46■□□□□ 0.711e-6■■■■■ 67.3
TRIM13-206ENST00000457662 CDH9Q9ULB4 789 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms