RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 HOXA9P31269 272 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.29
C9orf139-201ENST00000457302 PLD1Q13393 1074 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 WDR72Q3MJ13 1102 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 WSCD1Q658N2 575 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 IQCEQ6IPM2 695 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 OTOP3Q7RTS5 596 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 NELFBQ8WX92 580 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 ZNF516Q92618 1163 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 ZNF512Q96ME7 567 aaPredicted RBP13.21□□□□□ -0.29
C9orf139-201ENST00000457302 RHOBTB2Q9BYZ6 727 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 SNX25Q9H3E2 840 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 CLSTN2Q9H4D0 955 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 METTL14Q9HCE5 456 aaKnown RBP13.21□□□□□ -0.29
C9orf139-201ENST00000457302 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
C9orf139-201ENST00000457302 DACH1Q9UI36 760 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 SIX4Q9UIU6 781 aa13.21□□□□□ -0.29
C9orf139-201ENST00000457302 SPTBN5Q9NRC6 3674 aaKnown RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 MBD3O95983 291 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 C4BPAP04003 597 aaKnown RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 PTPN2P17706 415 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 EPHB3P54753 998 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 CLDN10P78369 228 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 NCOA4Q13772 614 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 CCDC40Q4G0X9 1142 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 TCEAL8Q8IYN2 117 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 ADGRF2Q8IZF7 708 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 C2orf15Q8WU43 125 aaKnown RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 TAF4BQ92750 862 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 CEP63Q96MT8 703 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 ACBD6Q9BR61 282 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 NXF1Q9UBU9 619 aaKnown RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
C9orf139-201ENST00000457302 MYO10Q9HD67 2058 aa13.2□□□□□ -0.3
C9orf139-201ENST00000457302 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 PTPRJQ12913 1337 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 PPP1R3GB7ZBB8 358 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 CCL16O15467 120 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 STAU1O95793 577 aaKnown RBP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 GNA14O95837 355 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 GBP2P32456 591 aaPredicted RBP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 GTF2H1P32780 548 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 GNL1P36915 607 aaPredicted RBP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 MYL6P60660 151 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 DLG4P78352 724 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 ZP2Q05996 745 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 CETN1Q12798 172 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 DUSP4Q13115 394 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 PAK1Q13153 545 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 TAF12Q16514 161 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 SLC39A12Q504Y0 691 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 ZCWPW2Q504Y3 356 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 CYP4A22Q5TCH4 519 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 KRT39Q6A163 491 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 CREBRFQ8IUR6 639 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 MLKLQ8NB16 471 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 SPPL2BQ8TCT7 592 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 EEF2KMTQ96G04 330 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 POMKQ9H5K3 350 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.19□□□□□ -0.3
C9orf139-201ENST00000457302 L1RE1Q9UN81 338 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
C9orf139-201ENST00000457302 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 ZNF197O14709 1029 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 ALADP13716 330 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
C9orf139-201ENST00000457302 FSHRP23945 695 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 PIK3CAP42336 1068 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 GCLMP48507 274 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 STX17P56962 302 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 SOWAHAQ2M3V2 549 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 ZACNQ401N2 412 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 DCAF17Q5H9S7 520 aaPredicted RBP13.18□□□□□ -0.3
C9orf139-201ENST00000457302 WDR44Q5JSH3 913 aa13.18□□□□□ -0.3
C9orf139-201ENST00000457302 TDRD10Q5VZ19 366 aaKnown RBP13.18□□□□□ -0.3
C9orf139-201ENST00000457302 FOXR2Q6PJQ5 311 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms