RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ARIH2O95376 493 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 ZCCHC18P0CG32 403 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 DYNC1I2Q13409 638 aaKnown RBP14.35□□□□□ -0.11
TOP3B-213ENST00000457179 SPOPLQ6IQ16 392 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 RBBP8NLQ8NC74 664 aaPredicted RBP14.35□□□□□ -0.11
TOP3B-213ENST00000457179 SLC30A5Q8TAD4 765 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 DTX3LQ8TDB6 740 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 FNBP1Q96RU3 617 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 TBC1D10AQ9BXI6 508 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 PREBQ9HCU5 417 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 ERFP50548 548 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 STAT5BP51692 787 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 EMC2Q15006 297 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 ZNF394Q53GI3 561 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 CGB2Q6NT52 195 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 SYCE1Q8N0S2 351 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 OLIG1Q8TAK6 271 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 AGPAT1Q99943 283 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 TMEM117Q9H0C3 514 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
TOP3B-213ENST00000457179 RHBDL2Q9NX52 303 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 KCND2Q9NZV8 630 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 TTLL13PA6NNM8 815 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
TOP3B-213ENST00000457179 POU5F1Q01860 360 aaKnown RBP14.35□□□□□ -0.11
TOP3B-213ENST00000457179 STRN3Q13033 797 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 ERO1BQ86YB8 467 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 PITPNM3Q9BZ71 974 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 DNAAF2Q9NVR5 837 aaKnown RBP14.35□□□□□ -0.11
TOP3B-213ENST00000457179 DMAC2Q9NW81 257 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 MTRF1LQ9UGC7 380 aaKnown RBP14.35□□□□□ -0.11
TOP3B-213ENST00000457179 FBXO40Q9UH90 709 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 INTUQ9ULD6 942 aa14.35□□□□□ -0.11
TOP3B-213ENST00000457179 SSC5DA1L4H1 1573 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 GTPBP10A4D1E9 387 aaKnown RBP14.34□□□□□ -0.11
TOP3B-213ENST00000457179 RIPK2O43353 540 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 COQ9O75208 318 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 PTENP60484 403 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 IRGCQ6NXR0 463 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 SEMA4DQ92854 862 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 MMADHCQ9H3L0 296 aaPredicted RBP14.34□□□□□ -0.11
TOP3B-213ENST00000457179 SUCLA2Q9P2R7 463 aaPredicted RBP14.34□□□□□ -0.11
TOP3B-213ENST00000457179 DGAT1O75907 488 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 SUPT20HL2P0C7V6 817 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 FDX1P10109 184 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 BRAFP15056 766 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 MPP2Q14168 576 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 ABHD15Q6UXT9 468 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 NIPA1Q7RTP0 329 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 SLC47A2Q86VL8 602 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
TOP3B-213ENST00000457179 RHPN2Q8IUC4 686 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 TMEM130Q8N3G9 435 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 RASGEF1CQ8N431 466 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 NAP1L3Q99457 506 aaPredicted RBP14.34□□□□□ -0.11
TOP3B-213ENST00000457179 MKNK1Q9BUB5 465 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 GALNT8Q9NY28 637 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 ALG6Q9Y672 507 aa14.34□□□□□ -0.11
TOP3B-213ENST00000457179 SPATA31C2B4DYI2 1134 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 KIAA0391O15091 583 aaKnown RBP14.33□□□□□ -0.11
TOP3B-213ENST00000457179 ZSCAN9O15535 394 aaPredicted RBP14.33□□□□□ -0.11
TOP3B-213ENST00000457179 RCN1Q15293 331 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 VSTM1Q6UX27 236 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 PASD1Q8IV76 773 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 ATL2Q8NHH9 583 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 SCG3Q8WXD2 468 aaKnown RBP14.33□□□□□ -0.11
TOP3B-213ENST00000457179 CDHR1Q96JP9 859 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 SPATA33Q96N06 139 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 RBPJLQ9UBG7 517 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 PRKAG3Q9UGI9 489 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 RASAL2Q9UJF2 1139 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.11
TOP3B-213ENST00000457179 INO80B-WBP1J3KQ70 363 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 TMEM253P0C7T8 217 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 ZBTB48P10074 688 aaPredicted RBP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 TXNP10599 105 aaKnown RBP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 NLRP11P59045 1033 aaKnown RBP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 XKR3Q5GH77 459 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 SNX30Q5VWJ9 437 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 RFWD3Q6PCD5 774 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 AGGF1Q8N302 714 aaeCLIP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 RNF149Q8NC42 400 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 HES6Q96HZ4 224 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 ZNF333Q96JL9 665 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 C12orf42Q96LP6 360 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 PCDHB18PQ96TA0 734 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 INO80BQ9C086 356 aaPredicted RBP14.33□□□□□ -0.12
TOP3B-213ENST00000457179 LRMDAQ9H2I8 198 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 RNF19AQ9NV58 838 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 LRCH1Q9Y2L9 728 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 BTNL10A8MVZ5 291 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 E7ENQ6 273 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 SETSIPP0DME0 302 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 SKIP12755 728 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 KCNJ1P48048 391 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 GTF2BQ00403 316 aa14.33□□□□□ -0.12
TOP3B-213ENST00000457179 MCL1Q07820 350 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms