RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 ZNF560Q96MR9 790 aa9.53□□□□□ -0.88
PKP4-207ENST00000457109 CCSER1Q9C0I3 900 aa9.53□□□□□ -0.88
PKP4-207ENST00000457109 HAPLN2Q9GZV7 340 aa9.53□□□□□ -0.88
PKP4-207ENST00000457109 BLOC1S4Q9NUP1 217 aa9.53□□□□□ -0.88
PKP4-207ENST00000457109 USP18Q9UMW8 372 aa9.53□□□□□ -0.88
PKP4-207ENST00000457109 KPNA7A9QM74 516 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 ANKRD63C9JTQ0 380 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 PIRO00625 290 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 MEFVO15553 781 aaPredicted RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 GCNT3O95395 438 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 CYP11A1P05108 521 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 NFICP08651 508 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 AVPR1AP37288 418 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 PLXNA3P51805 1871 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 RPL10AP62906 217 aaKnown RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 TFAMQ00059 246 aaKnown RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 CEBPZQ03701 1054 aaKnown RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 BFSP1Q12934 665 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 ALCAMQ13740 583 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 NFE2Q16621 373 aaPredicted RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 ZC2HC1CQ53FD0 456 aaPredicted RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 MAMSTRQ6ZN01 415 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 PRR23BQ6ZRT6 265 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 DENND4AQ7Z401 1863 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 RALGPS2Q86X27 583 aaPredicted RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 SPEM1Q8N4L4 309 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 SUMF1Q8NBK3 374 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 ZBTB44Q8NCP5 570 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 BPIFB1Q8TDL5 484 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 FAM213AQ9BRX8 229 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 CHRDQ9H2X0 955 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 TASP1Q9H6P5 420 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 OBP2AQ9NY56 170 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 SMG5Q9UPR3 1016 aaKnown RBP9.52□□□□□ -0.89
PKP4-207ENST00000457109 PCDHB5Q9Y5E4 795 aa9.52□□□□□ -0.89
PKP4-207ENST00000457109 ANO9A1A5B4 782 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 SLC38A8A6NNN8 435 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 PRPF40AO75400 957 aaKnown RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 MOSPD3O75425 235 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 SOAT2O75908 522 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 KRT19P08727 400 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 DDX6P26196 483 aaKnown RBP eCLIP9.51□□□□□ -0.89
PKP4-207ENST00000457109 CNR2P34972 360 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 STAT6P42226 847 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 AMPD3Q01432 767 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 MYL7Q01449 175 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 LMNB2Q03252 620 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 FCHO2Q0JRZ9 810 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 SIM2Q14190 667 aaPredicted RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 RSPO4Q2I0M5 234 aaPredicted RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 ITPRIPL2Q3MIP1 535 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 WSCD1Q658N2 575 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 CEP68Q76N32 757 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 SFR1Q86XK3 245 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 CCDC65Q8IXS2 484 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 CSGALNACT2Q8N6G5 542 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 TTC8Q8TAM2 541 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 MRPS31Q92665 395 aaKnown RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 RMDN1Q96DB5 314 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 EPSTI1Q96J88 318 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 PANK2Q9BZ23 570 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 ZCWPW1Q9H0M4 648 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 EPC1Q9H2F5 836 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 TMEM206Q9H813 350 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 ABI2Q9NYB9 513 aaPredicted RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 TBC1D7Q9P0N9 293 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 UXTQ9UBK9 157 aaPredicted RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 CDV3Q9UKY7 258 aaKnown RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 MAGED2Q9UNF1 606 aaPredicted RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 AGAP1Q9UPQ3 857 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 SRPRBQ9Y5M8 271 aaKnown RBP9.51□□□□□ -0.89
PKP4-207ENST00000457109 CLIC4Q9Y696 253 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 STYXL1Q9Y6J8 313 aa9.51□□□□□ -0.89
PKP4-207ENST00000457109 C2orf16Q68DN1 1984 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 SPECC1L-ADORA2AF8WAN1 911 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 PPEF2O14830 753 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 FAM189A1O60320 539 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 LILRB5O75023 590 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 ATG13O75143 517 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
PKP4-207ENST00000457109 TMEM191BP0C7N4 346 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 CSH1P0DML2 217 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 CSH2P0DML3 217 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 HAPLN1P10915 354 aaPredicted RBP9.5□□□□□ -0.89
PKP4-207ENST00000457109 WEE1P30291 646 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 LHX1P48742 406 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 RBP5P82980 135 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 GRSF1Q12849 480 aaKnown RBP eCLIP9.5□□□□□ -0.89
PKP4-207ENST00000457109 MYO1EQ12965 1108 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 SURF1Q15526 300 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 L1TD1Q5T7N2 865 aaKnown RBP9.5□□□□□ -0.89
PKP4-207ENST00000457109 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 SLC39A4Q6P5W5 647 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 GAREM2Q75VX8 874 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 TMC8Q8IU68 726 aa9.5□□□□□ -0.89
PKP4-207ENST00000457109 SPATA2LQ8IUW3 424 aaPredicted RBP9.5□□□□□ -0.89
PKP4-207ENST00000457109 TMEM86AQ8N2M4 240 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms