RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CLEC1BQ9P126 229 aa15.16■□□□□ 0.02
SMPD4-215ENST00000457039 POLIQ9UNA4 740 aa15.16■□□□□ 0.02
SMPD4-215ENST00000457039 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMPD4-215ENST00000457039 PLXNA3P51805 1871 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 WDR27A2RRH5 827 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 N4BP1O75113 896 aaKnown RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 TACC1O75410 805 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 ABLIM3O94929 683 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 GLUD1P00367 558 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 AFPP02771 609 aaKnown RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 WARSP23381 471 aaKnown RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 TNNC1P63316 161 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 NOP14P78316 857 aaKnown RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 MYL7Q01449 175 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 LLGL2Q6P1M3 1020 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 PALB2Q86YC2 1186 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 ADGRF2Q8IZF7 708 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 CASP10Q92851 521 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 TMEM209Q96SK2 561 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 NAT10Q9H0A0 1025 aaKnown RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 UBE2ZQ9H832 354 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 PRDM6Q9NQX0 595 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 FANCLQ9NW38 375 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 NXF1Q9UBU9 619 aaKnown RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 FBXW11Q9UKB1 542 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 BARX2Q9UMQ3 279 aaPredicted RBP15.15■□□□□ 0.02
SMPD4-215ENST00000457039 NME7Q9Y5B8 376 aa15.15■□□□□ 0.02
SMPD4-215ENST00000457039 KCNJ18B7U540 433 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 OR4Q2P0C623 313 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 ZNF18P17022 549 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 EEF1GP26641 437 aaKnown RBP15.14■□□□□ 0.01
SMPD4-215ENST00000457039 ASPAP45381 313 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 LHX1P48742 406 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 KCNJ12Q14500 433 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 SKIV2LQ15477 1246 aaKnown RBP15.14■□□□□ 0.01
SMPD4-215ENST00000457039 MAN2A1Q16706 1144 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 HSP90AA4PQ58FG1 418 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 TCP11X2Q5H9J9 407 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 MIIPQ5JXC2 388 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 DHX40Q8IX18 779 aaKnown RBP15.14■□□□□ 0.01
SMPD4-215ENST00000457039 ZNF461Q8TAF7 563 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 LMO3Q8TAP4 145 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 HDAC7Q8WUI4 952 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 HLA-CQ95604 372 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 FAXDC2Q96IV6 333 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 MSLNLQ96KJ4 702 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 MMS19Q96T76 1030 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 ACBD6Q9BR61 282 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 MRPL45Q9BRJ2 306 aaKnown RBP15.14■□□□□ 0.01
SMPD4-215ENST00000457039 BCO2Q9BYV7 579 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 IMPG2Q9BZV3 1241 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 ZCWPW1Q9H0M4 648 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 SDCBP2Q9H190 292 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 SMYD3Q9H7B4 428 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 DDX43Q9NXZ2 648 aaKnown RBP15.14■□□□□ 0.01
SMPD4-215ENST00000457039 COG5Q9UP83 839 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 BRWD1Q9NSI6 2320 aa15.14■□□□□ 0.01
SMPD4-215ENST00000457039 HCRTO43612 131 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 PAPLNO95428 1278 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 VNN2O95498 520 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 LMO2P25791 158 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 MTIF2P46199 727 aaKnown RBP15.13■□□□□ 0.01
SMPD4-215ENST00000457039 ZNF165P49910 485 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 CDH8P55286 799 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 GPR17Q13304 367 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 IQCB1Q15051 598 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 TPGS2Q68CL5 300 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 ANKRD54Q6NXT1 300 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 SYCE2Q6PIF2 218 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 LRRTM3Q86VH5 581 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 THEM5Q8N1Q8 247 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 AOPEPQ8N6M6 819 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 PKMYT1Q99640 499 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 TUBGCP2Q9BSJ2 902 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 NIF3L1Q9GZT8 377 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.011e-12■■■■■ 111.8
SMPD4-215ENST00000457039 MAN1C1Q9NR34 630 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 DZANK1Q9NVP4 752 aa15.13■□□□□ 0.01
SMPD4-215ENST00000457039 MAGEC2Q9UBF1 373 aaPredicted RBP15.13■□□□□ 0.01
SMPD4-215ENST00000457039 SPATA31D3P0C874 917 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 SRGAP2BP0DMP2 458 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 P4HA1P13674 534 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 ATF2P15336 505 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 ACAT1P24752 427 aaKnown RBP15.12■□□□□ 0.01
SMPD4-215ENST00000457039 RAP1GAPP47736 663 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 ARPP19P56211 112 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 VWA3BQ502W6 1294 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 INTS6LQ5JSJ4 861 aaKnown RBP15.12■□□□□ 0.01
SMPD4-215ENST00000457039 SCARA5Q6ZMJ2 495 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 RNF19BQ6ZMZ0 732 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 SPATA31D4Q6ZUB0 917 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 KREMEN2Q8NCW0 462 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 TATDN2Q93075 761 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 PLEKHA4Q9H4M7 779 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 CYP3A43Q9HB55 503 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 AFF4Q9UHB7 1163 aaKnown RBP15.12■□□□□ 0.01
SMPD4-215ENST00000457039 MAFFQ9ULX9 164 aa15.12■□□□□ 0.01
SMPD4-215ENST00000457039 GTPBP10A4D1E9 387 aaKnown RBP15.11■□□□□ 0.01
SMPD4-215ENST00000457039 MTMR11A4FU01 709 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms