RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CHMP6Q96FZ7 201 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 SERPINB12Q96P63 405 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 PCDHGC3Q9UN70 934 aa19.46■□□□□ 0.71
SEMA3B-209ENST00000456560 KLRC2P26717 231 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 NF2P35240 595 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 GJC1P36383 396 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 CCDC13Q8IYE1 715 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 TMEM35BQ8NCS4 154 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 BBOF1Q8ND07 529 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 TFAP2BQ92481 460 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 SLITRK1Q96PX8 696 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 FAM118BQ9BPY3 351 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 XYLT2Q9H1B5 865 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 FZD8Q9H461 694 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 ELP3Q9H9T3 547 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 ACKR2O00590 384 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 ACSL3O95573 720 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 ASPAP45381 313 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 OGDHQ02218 1023 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 LONRF1Q17RB8 773 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 GPAT2Q6NUI2 795 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 MPZL3Q6UWV2 235 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 CCDC121Q6ZUS5 278 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 EXOC3L1Q86VI1 746 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 CCDC89Q8N998 374 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 RBM41Q96IZ5 413 aaKnown RBP19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 MPHOSPH6Q99547 160 aaKnown RBP19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 CCDC134Q9H6E4 229 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 TXNRD2Q9NNW7 524 aa19.45■□□□□ 0.7
SEMA3B-209ENST00000456560 DNAJC25-GNG10A0A024R161 153 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 CXCL11O14625 94 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 TCEA3O75764 348 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 TRPC3Q13507 836 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 KYNUQ16719 465 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 DNAJC24Q6P3W2 148 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 CCDC62Q6P9F0 684 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 ZNF365Q70YC5 407 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 RELL1Q8IUW5 271 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 OTUD5Q96G74 571 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 NINJ2Q9NZG7 142 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 RBPJLQ9UBG7 517 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 IVNS1ABPQ9Y6Y0 642 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 PI4K2BG5E9Z4 385 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 NOP56O00567 594 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 B4GALT4O60513 344 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 WEE2P0C1S8 567 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 EIF4BP23588 611 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 CETN2P41208 172 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 TFAMQ00059 246 aaKnown RBP19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 DRICH1Q6PGQ1 229 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 CPLX4Q7Z7G2 160 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 RHPN2Q8IUC4 686 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 PWWP2AQ96N64 755 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 MCEEQ96PE7 176 aa19.44■□□□□ 0.7
SEMA3B-209ENST00000456560 LOC102724159A0A0B4J2E5 919 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 F8VP50 259 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 LIASO43766 372 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 PTPN7P35236 360 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 MAP2K2P36507 400 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 IREB2P48200 963 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 VPS41P49754 854 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 GSCP56915 257 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 TAP1Q03518 808 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 PWP2Q15269 919 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 ZNF699Q32M78 642 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 Q3C1V9 767 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 ZNF394Q53GI3 561 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 ATF7IP2Q5U623 682 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 IZUMO3Q5VZ72 239 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 EEF1DP3Q658K8 133 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 HIBCHQ6NVY1 386 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 MFSD7Q6UXD7 560 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 TAOK1Q7L7X3 1001 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 ERO1BQ86YB8 467 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 CACNA2D3Q8IZS8 1091 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 DCPSQ96C86 337 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 CLMNQ96JQ2 1002 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 JPH2Q9BR39 696 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 KLC4Q9NSK0 619 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 INTS9Q9NV88 658 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 KLHL11Q9NVR0 708 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 KRT1P04264 644 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 KRT10P13645 584 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 LMNB2Q03252 620 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 CNGA2Q16280 664 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 EAPPQ56P03 285 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 GKAP1Q5VSY0 366 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 SPOCD1Q6ZMY3 1216 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 THNSL1Q8IYQ7 743 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 NIPA2Q8N8Q9 360 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 TRAPPC12Q8WVT3 735 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 SPATA33Q96N06 139 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 DNAJC17Q9NVM6 304 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 AGTPBP1Q9UPW5 1226 aa19.43■□□□□ 0.7
SEMA3B-209ENST00000456560 ANK1P16157 1881 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 B4GALT5O43286 388 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 TNNC2P02585 160 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 EPHX2P34913 555 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms