RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ELSPBP1Q96BH3 223 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 MCRS1Q96EZ8 462 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 PDE11AQ9HCR9 933 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 AGPAT3Q9NRZ7 376 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 CA14Q9ULX7 337 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 AGAP1Q9UPQ3 857 aa19.25■□□□□ 0.67
MSH6-207ENST00000456246 KRBA1A5PL33 1030 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 TULP1O00294 542 aaPredicted RBP19.24■□□□□ 0.67
MSH6-207ENST00000456246 HUS1O60921 280 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 VNN2O95498 520 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 TNNC2P02585 160 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 HOXD13P35453 343 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 AFMP43652 599 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 WNT7BP56706 349 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 GPC5P78333 572 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 TSPY1Q01534 308 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 VEPH1Q14D04 833 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 WSCD1Q658N2 575 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 DCP1BQ8IZD4 617 aaKnown RBP19.24■□□□□ 0.67
MSH6-207ENST00000456246 CSGALNACT2Q8N6G5 542 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 ATAD1Q8NBU5 361 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 GOLGA5Q8TBA6 731 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 LEO1Q8WVC0 666 aaPredicted RBP19.24■□□□□ 0.67
MSH6-207ENST00000456246 SCFD1Q8WVM8 642 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 RPP25Q9BUL9 199 aaKnown RBP19.24■□□□□ 0.67
MSH6-207ENST00000456246 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
MSH6-207ENST00000456246 BLZF1Q9H2G9 400 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 TBC1D17Q9HA65 648 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 INTS13Q9NVM9 706 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 GDAP2Q9NXN4 497 aa19.24■□□□□ 0.67
MSH6-207ENST00000456246 STK25O00506 426 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 ACTN4O43707 911 aaKnown RBP19.23■□□□□ 0.67
MSH6-207ENST00000456246 PRPF40AO75400 957 aaKnown RBP19.23■□□□□ 0.67
MSH6-207ENST00000456246 MYL4P12829 197 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 PRKCQQ04759 706 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 MYO1EQ12965 1108 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 DUOXA2Q1HG44 320 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 SLC39A12Q504Y0 691 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 CBWD2Q8IUF1 395 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 WDR49Q8IV35 697 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 C12orf56Q8IXR9 622 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 XXYLT1Q8NBI6 393 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 PSMG2Q969U7 264 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 TCEAL4Q96EI5 215 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 TMEM209Q96SK2 561 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 KXD1Q9BQD3 176 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 MTMR12Q9C0I1 747 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 CRISPLD1Q9H336 500 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 ZFP14Q9HCL3 533 aa19.23■□□□□ 0.67
MSH6-207ENST00000456246 TGFB1I1O43294 461 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 KRT19P08727 400 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 PFKFB1P16118 471 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 CCR2P41597 374 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 MYL7Q01449 175 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 BFSP1Q12934 665 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 PSMD2Q13200 908 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 CUL4BQ13620 913 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 BECN1Q14457 450 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 SNRNP35Q16560 246 aaKnown RBP19.22■□□□□ 0.67
MSH6-207ENST00000456246 NFE2Q16621 373 aaPredicted RBP19.22■□□□□ 0.67
MSH6-207ENST00000456246 DPH6Q7L8W6 267 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 CCDC105Q8IYK2 499 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 HS6ST3Q8IZP7 471 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 PDCL2Q8N4E4 241 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 TOP6BLQ8N6T0 577 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 CXorf38Q8TB03 319 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 SMARCD2Q92925 531 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 E2F7Q96AV8 911 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 ASB16Q96NS5 453 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 DNAJC25Q9H1X3 360 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 EXOC1Q9NV70 894 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 SERTAD1Q9UHV2 236 aa19.22■□□□□ 0.67
MSH6-207ENST00000456246 STARD6P59095 220 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 KNOP1Q1ED39 458 aaKnown RBP19.21■□□□□ 0.67
MSH6-207ENST00000456246 MGAT5BQ3V5L5 792 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 FAM78AQ5JUQ0 283 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 TMC8Q8IU68 726 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 NELFCDQ8IXH7 590 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 DEPDC1BQ8WUY9 529 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 DNASE1L2Q92874 299 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 PAGE5Q96GU1 130 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 FNBP1Q96RU3 617 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 SEPT5Q99719 369 aaPredicted RBP19.21■□□□□ 0.67
MSH6-207ENST00000456246 ACBD6Q9BR61 282 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 LRRC3Q9BY71 257 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 TRPV4Q9HBA0 871 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 SLC39A2Q9NP94 309 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 SIX4Q9UIU6 781 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 L1RE1Q9UN81 338 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 HPSEQ9Y251 543 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 SLC27A5Q9Y2P5 690 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 ZDHHC9Q9Y397 364 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 SNX9Q9Y5X1 595 aa19.21■□□□□ 0.67
MSH6-207ENST00000456246 FAM237AA0A1B0GTK4 181 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 A0A1B0GVL5 298 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 MOSPD3O75425 235 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 FCARP24071 287 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 PCSK1P29120 753 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 CASP1P29466 404 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 SYKP43405 635 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms