RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 MYCT1Q8N699 235 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 SCAIQ8N9R8 606 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 SCG3Q8WXD2 468 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 MPP4Q96JB8 637 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 ZMAT2Q96NC0 199 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 KRT12Q99456 494 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 SPATC1LQ9H0A9 340 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 TLE6Q9H808 572 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 MLXIPQ9HAP2 919 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 OLFML3Q9NRN5 406 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 FBXO40Q9UH90 709 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 FAM32AQ9Y421 112 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 HEY1Q9Y5J3 304 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 PFASO15067 1338 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 MYH9P35579 1960 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 ZNFX1Q9P2E3 1918 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 WDR64B1ANS9 1081 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 TRAFD1O14545 582 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 ZNF263O14978 683 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 STAM2O75886 525 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 RGS20O76081 388 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 GCNT3O95395 438 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 CCNE2O96020 404 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 ETS2P15036 469 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 NFKBIAP25963 317 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 DCTN2Q13561 401 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 HLTFQ14527 1009 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 MAN2A1Q16706 1144 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 KNOP1Q1ED39 458 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 VWA3BQ502W6 1294 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 CHADLQ6NUI6 762 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 OTUD6AQ7L8S5 288 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 CYP4X1Q8N118 509 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 DNERQ8NFT8 737 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 TTC8Q8TAM2 541 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 GDAP1Q8TB36 358 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 UBLCP1Q8WVY7 318 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 NRG4Q8WWG1 115 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 GAB3Q8WWW8 586 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 ATP6V0A1Q93050 837 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 CEP63Q96MT8 703 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 SH3GL1Q99961 368 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 TXLNGYQ9BZA5 131 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 PARVGQ9HBI0 331 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 AIPL1Q9NZN9 384 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 DBR1Q9UK59 544 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 AGTPBP1Q9UPW5 1226 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.07□□□□□ -1.12
HDAC9-218ENST00000456174 USH1CQ9Y6N9 552 aa8.07□□□□□ -1.12
HDAC9-218ENST00000456174 ARID2Q68CP9 1835 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 LYPLA2O95372 231 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 NUDT17P0C025 328 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CDK4P11802 303 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CXCR5P32302 372 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 HOXD13P35453 343 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CNTN2Q02246 1040 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 MOGSQ13724 837 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 SPA17Q15506 151 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 STXBP2Q15833 593 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 BMT2Q1RMZ1 405 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 EDRF1Q3B7T1 1238 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 WDR72Q3MJ13 1102 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 LDLRAD1Q5T700 205 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 KLHDC7AQ5VTJ3 777 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 PADI6Q6TGC4 694 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 LRRC74BQ6ZQY2 392 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 FASTKD5Q7L8L6 764 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 PALB2Q86YC2 1186 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 ST13P4Q8IZP2 240 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 MS4A14Q96JA4 679 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CDHR1Q96JP9 859 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 PRMT1Q99873 361 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 SELENOSQ9BQE4 189 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 MAK16Q9BXY0 300 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 MRPL46Q9H2W6 279 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 METTL14Q9HCE5 456 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 SEL1LQ9UBV2 794 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 PPME1Q9Y570 386 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CES2O00748 559 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 PDXKO00764 312 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 TTI1O43156 1089 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 NCK2O43639 380 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CNMDO75829 334 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 AGTP01019 485 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 KCNA2P16389 499 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 NMT1P30419 496 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 YWHABP31946 246 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 GALK1P51570 392 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 RAB15P59190 212 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 PSMC5P62195 406 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CNGA2Q16280 664 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 UGCGQ16739 394 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 MAP1SQ66K74 1059 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 CROCCP2Q86T23 111 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 LRRC49Q8IUZ0 686 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 ZC3H3Q8IXZ2 948 aaKnown RBP8.06□□□□□ -1.12
HDAC9-218ENST00000456174 C4orf19Q8IY42 314 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 ZBED8Q8IZ13 594 aa8.06□□□□□ -1.12
HDAC9-218ENST00000456174 NUP93Q8N1F7 819 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms