RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SLC27A1Q6PCB7 646 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 ADAMTSL4Q6UY14 1074 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 CCDC149Q6ZUS6 474 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 OTOP3Q7RTS5 596 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM35AQ86V20 835 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 UBALD2Q8IYN6 164 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 RNF168Q8IYW5 571 aaPredicted RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 TMEM130Q8N3G9 435 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 C4orf32Q8N8J7 132 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 CEP120Q8N960 986 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 FLCNQ8NFG4 579 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 SMG7Q92540 1137 aaKnown RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 ZNF707Q96C28 371 aaPredicted RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 ACSF2Q96CM8 615 aaPredicted RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 CRELD1Q96HD1 420 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 MYADMQ96S97 322 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 TCF12Q99081 682 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 KIF2CQ99661 725 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 POLR3CQ9BUI4 534 aaPredicted RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 RPP25Q9BUL9 199 aaKnown RBP5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 HERC2P3Q9BVR0 1158 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 NFKBIZQ9BYH8 718 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 NT5C3AQ9H0P0 336 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 MFSD1Q9H3U5 465 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 FZD8Q9H461 694 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 PDZD7Q9H5P4 517 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 PIDD1Q9HB75 910 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 RXFP1Q9HBX9 757 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 TUFT1Q9NNX1 390 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 ABCB6Q9NP58 842 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 CHST7Q9NS84 486 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 DZANK1Q9NVP4 752 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM8A1Q9UBU6 413 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 LIMCH1Q9UPQ0 1083 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 GDAQ9Y2T3 454 aa5.17□□□□□ -1.58
GTF3C3-208ENST00000455546 PIEZO1Q92508 2521 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 ARHGEF35A5YM69 484 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 CCDC169A6NNP5 214 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PP2D1A8MPX8 630 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 E9PMD0 336 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 I3L4J1 428 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 ACKR2O00590 384 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PTGESO14684 152 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 SIN3BO75182 1162 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 RECQL4O94761 1208 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PRKCBP05771 671 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 THP07101 528 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 OR52Z1P0C646 297 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 RPA1P27694 616 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 ADH6P28332 368 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PEX3P56589 373 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 GRIK3Q13003 919 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 TUSC3Q13454 348 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 TDGQ13569 410 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 GNL2Q13823 731 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 HSP90AA2PQ14568 343 aaPredicted RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PCBP1Q15365 356 aaKnown RBP eCLIP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 ZRSR1Q15695 479 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 NAB2Q15742 525 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 MAPK6Q16659 721 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM187BQ17R55 369 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PERM1Q5SV97 790 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 CEP135Q66GS9 1140 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 LILRA6Q6PI73 481 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 DTHD1Q6ZMT9 781 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 C15orf39Q6ZRI6 1047 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 HACE1Q8IYU2 909 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 SLC44A3Q8N4M1 653 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM184AQ8NB25 1140 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 MCPH1Q8NEM0 835 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 FBXO18Q8NFZ0 1043 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 DEPTORQ8TB45 409 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 LNX1Q8TBB1 728 aaPredicted RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 NUDT8Q8WV74 236 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 RSPH1Q8WYR4 309 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 CCDC51Q96ER9 411 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PLIN2Q99541 437 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 CLSTN3Q9BQT9 956 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 CCDC113Q9H0I3 377 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 SMG9Q9H0W8 520 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 BHMT2Q9H2M3 363 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 FOXP1Q9H334 677 aaPredicted RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 GOLGA2P5Q9HBQ8 144 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 WDR6Q9NNW5 1121 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 DDX19AQ9NUU7 478 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PRMT7Q9NVM4 692 aaPredicted RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 LRWD1Q9UFC0 647 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 ADAM28Q9UKQ2 775 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 FBXL21Q9UKT6 434 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 CA14Q9ULX7 337 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 SSX2IPQ9Y2D8 614 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 PCDHB6Q9Y5E3 794 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 FAM186AA6NE01 2351 aa5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 RIF1Q5UIP0 2472 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-208ENST00000455546 COL4A3Q01955 1670 aa5.15□□□□□ -1.58
GTF3C3-208ENST00000455546 MIA3Q5JRA6 1907 aa5.15□□□□□ -1.58
GTF3C3-208ENST00000455546 KRBA1A5PL33 1030 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 K7ERI5 159 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 PDE2AO00408 941 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms