RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 IL21Q9HBE4 155 aa20.28■□□□□ 0.84
MSH6-206ENST00000455383 NPHP3-ACAD11A0A0J9YXS1 232 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 OGTO15294 1046 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 FOXD2O60548 495 aaPredicted RBP20.27■□□□□ 0.84
MSH6-206ENST00000455383 CYP11A1P05108 521 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 SCP2P22307 547 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 MATR3P43243 847 aaKnown RBP eCLIP20.27■□□□□ 0.84
MSH6-206ENST00000455383 LIG4P49917 911 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 PLCB2Q00722 1185 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 CACNB1Q02641 598 aaPredicted RBP20.27■□□□□ 0.84
MSH6-206ENST00000455383 ZRSR1Q15695 479 aaKnown RBP20.27■□□□□ 0.84
MSH6-206ENST00000455383 PPM1JQ5JR12 505 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.27■□□□□ 0.84
MSH6-206ENST00000455383 ITIH5Q86UX2 942 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 WDR5BQ86VZ2 330 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 OR10T2Q8NGX3 314 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 BICD1Q96G01 975 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 TASP1Q9H6P5 420 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 RPF1Q9H9Y2 349 aaKnown RBP20.27■□□□□ 0.84
MSH6-206ENST00000455383 ODF2LQ9ULJ1 636 aa20.27■□□□□ 0.84
MSH6-206ENST00000455383 TSC2P49815 1807 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 A0A0B4J269 797 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 PIRO00625 290 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 DPYSL4O14531 572 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 SOAT2O75908 522 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 PRAMEF12O95522 483 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 HOXC13P31276 330 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 PON2Q15165 354 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 ARHGAP15Q53QZ3 475 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 RILPL1Q5EBL4 403 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 C9orf57Q5W0N0 161 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 ARMCX5Q6P1M9 558 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 CD302Q8IX05 232 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 FAM160A2Q8N612 972 aaPredicted RBP20.26■□□□□ 0.83
MSH6-206ENST00000455383 BPIFB1Q8TDL5 484 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 PLIN2Q99541 437 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 KIF2CQ99661 725 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 CPSF3Q9UKF6 684 aaKnown RBP20.26■□□□□ 0.83
MSH6-206ENST00000455383 TBX20Q9UMR3 447 aa20.26■□□□□ 0.83
MSH6-206ENST00000455383 KIF26AQ9ULI4 1882 aaPredicted RBP20.25■□□□□ 0.83
MSH6-206ENST00000455383 ANO9A1A5B4 782 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 GDF9O60383 454 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 ODC1P11926 461 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 ATF6P18850 670 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 TUFMP49411 452 aaKnown RBP20.25■□□□□ 0.83
MSH6-206ENST00000455383 ZNF131P52739 623 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 HEATR6Q6AI08 1181 aaKnown RBP20.25■□□□□ 0.83
MSH6-206ENST00000455383 JADE1Q6IE81 842 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 TTC8Q8TAM2 541 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 LPIN3Q9BQK8 851 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 ZCWPW1Q9H0M4 648 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 DERAQ9Y315 318 aa20.25■□□□□ 0.83
MSH6-206ENST00000455383 HNRNPDLO14979 420 aaKnown RBP20.24■□□□□ 0.83
MSH6-206ENST00000455383 SLC26A4O43511 780 aa20.24■□□□□ 0.83
MSH6-206ENST00000455383 TNK2Q07912 1038 aa20.24■□□□□ 0.83
MSH6-206ENST00000455383 ARL6IP4Q66PJ3 421 aaKnown RBP20.24■□□□□ 0.83
MSH6-206ENST00000455383 SLC39A4Q6P5W5 647 aa20.24■□□□□ 0.83
MSH6-206ENST00000455383 FAM200AQ8TCP9 573 aa20.24■□□□□ 0.83
MSH6-206ENST00000455383 FIZ1Q96SL8 496 aa20.24■□□□□ 0.83
MSH6-206ENST00000455383 REEP2Q9BRK0 252 aa20.24■□□□□ 0.83
MSH6-206ENST00000455383 CCDC163A0A0D9SF12 145 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 VWA3AA6NCI4 1184 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 NFICP08651 508 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 CDC25CP30307 473 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 LIMK1P53667 647 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 CYP4F8P98187 520 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 ITPRIPL2Q3MIP1 535 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 LRRC15Q8TF66 581 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 CDK5RAP3Q96JB5 506 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 LOXL4Q96JB6 756 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 FAM83CQ9BQN1 747 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 MSTO1Q9BUK6 570 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 SLC46A2Q9BY10 475 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 PPP4R2Q9NY27 417 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 ZMYM5Q9UJ78 669 aa20.23■□□□□ 0.83
MSH6-206ENST00000455383 RALGAPA1Q6GYQ0 2036 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 EXTL3O43909 919 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 MCM2P49736 904 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 VEPH1Q14D04 833 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 MGAT5BQ3V5L5 792 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 SLC39A12Q504Y0 691 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 PKN3Q6P5Z2 889 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 CEP68Q76N32 757 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 C2orf15Q8WU43 125 aaKnown RBP20.22■□□□□ 0.83
MSH6-206ENST00000455383 DDX1Q92499 740 aaKnown RBP20.22■□□□□ 0.83
MSH6-206ENST00000455383 CHFRQ96EP1 664 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 SEPT5Q99719 369 aaPredicted RBP20.22■□□□□ 0.83
MSH6-206ENST00000455383 CCSER1Q9C0I3 900 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 ASB7Q9H672 318 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 BLOC1S4Q9NUP1 217 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 DSEQ9UL01 958 aa20.22■□□□□ 0.83
MSH6-206ENST00000455383 K7ENM7 598 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 TM4SF5O14894 197 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 HAPLN1P10915 354 aaPredicted RBP20.21■□□□□ 0.83
MSH6-206ENST00000455383 RAP1GAPP47736 663 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 GTF2BQ00403 316 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 SMARCB1Q12824 385 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 TMEM132DQ14C87 1099 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 PTPAQ15257 358 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 TMEM196Q5HYL7 178 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms