RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 ZIM3Q96PE6 472 aa9.39□□□□□ -0.91
RPE-216ENST00000454822 SH3GL2Q99962 352 aa9.39□□□□□ -0.91
RPE-216ENST00000454822 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
RPE-216ENST00000454822 CYP3A43Q9HB55 503 aa9.39□□□□□ -0.91
RPE-216ENST00000454822 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
RPE-216ENST00000454822 GJD2Q9UKL4 321 aa9.39□□□□□ -0.91
RPE-216ENST00000454822 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
RPE-216ENST00000454822 C2CD2Q9Y426 696 aa9.39□□□□□ -0.91
RPE-216ENST00000454822 HAS3O00219 553 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 O00370 1275 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 MED7O43513 233 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 OPA1O60313 960 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 PAEPP09466 180 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 FLT3P36888 993 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 COILP38432 576 aaPredicted RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 RGS2P41220 211 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 DRG2P55039 364 aaKnown RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 ADAM17P78536 824 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 RBP5P82980 135 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 DCAF4L1Q3SXM0 396 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 CCDC137Q6PK04 289 aaKnown RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 CATSPER4Q7RTX7 472 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 SAPCD2Q86UD0 394 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 NT5DC4Q86YG4 428 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 CD302Q8IX05 232 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 RHOT1Q8IXI2 618 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 SLC4A11Q8NBS3 891 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 EXOC4Q96A65 974 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 TWNKQ96RR1 684 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 OSMRQ99650 979 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 ELOVL4Q9GZR5 314 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 AP5M1Q9H0R1 490 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 LHX5Q9H2C1 402 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 IP6K2Q9UHH9 426 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 ITGA11Q9UKX5 1188 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 USTQ9Y2C2 406 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 CEP83Q9Y592 693 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 TRPM7Q96QT4 1865 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 PSTPIP1O43586 416 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 CILPO75339 1184 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 MYL3P08590 195 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 P4HA1P13674 534 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 DARSP14868 501 aaKnown RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 MAN1A1P33908 653 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 BEX3Q00994 111 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 ORC1Q13415 861 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 DNAJC24Q6P3W2 148 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 SLC27A1Q6PCB7 646 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 ZNF771Q7L3S4 317 aaPredicted RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 C12orf50Q8NA57 414 aaPredicted RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 DNAJB3Q8WWF6 145 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 TMEM176AQ96HP8 235 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 RUFY1Q96T51 708 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 HERPUD2Q9BSE4 406 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 EIF2AQ9BY44 585 aaKnown RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 CXCL16Q9H2A7 254 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 LRRC19Q9H756 370 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 PLEKHA5Q9HAU0 1116 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 SNTG2Q9NY99 539 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.38□□□□□ -0.91
RPE-216ENST00000454822 HMGXB4Q9UGU5 601 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 RASAL2Q9UJF2 1139 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 SNX24Q9Y343 169 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 Q9Y3F1 56 aa9.38□□□□□ -0.91
RPE-216ENST00000454822 CITO14578 2027 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 PODXLO00592 558 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 IGHA2P01877 340 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 SSR1P43307 286 aaKnown RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 KCNJ1P48048 391 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 FNTAP49354 379 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 CPT1AP50416 773 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 INHBEP58166 350 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 PTPN11Q06124 597 aaPredicted RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 PPP1R15BQ5SWA1 713 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 CYP4A22Q5TCH4 519 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 DCUN1D2Q6PH85 259 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 CCDC105Q8IYK2 499 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 KATNAL2Q8IYT4 538 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 GOLGA6L1Q8N7Z2 621 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 MAIP1Q8WWC4 291 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 C1orf54Q8WWF1 131 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 RUNDC3BQ96NL0 473 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 FAM204AQ9H8W3 233 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 ZFYVE28Q9HCC9 887 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 PSD3Q9NYI0 1048 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 CYTH4Q9UIA0 394 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 PCNTO95613 3336 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 GOLGA8KD6RF30 607 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 TNPO2O14787 897 aaKnown RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 TREHO43280 583 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 SLC10A3P09131 477 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 HSD17B3P37058 310 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 OGDHQ02218 1023 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 TAP1Q03518 808 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 ZNF252P-AS1Q0IIN9 211 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms