RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RPL9P32969 192 aaKnown RBP6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 AARSP49588 968 aaKnown RBP eCLIP6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LIG4P49917 911 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 WNT7BP56706 349 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARHGAP8P85298 464 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GRIN1Q05586 938 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MCL1Q07820 350 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CCINQ13939 588 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LRRC32Q14392 662 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MGAT5BQ3V5L5 792 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 KRT79Q5XKE5 535 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FSTL4Q6MZW2 842 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DSTYKQ6XUX3 929 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 USP37Q86T82 979 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GPBP1Q86WP2 473 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MFSD6LQ8IWD5 586 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ABCA7Q8IZY2 2146 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SPEM1Q8N4L4 309 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 APPL2Q8NEU8 664 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 BEST2Q8NFU1 509 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FBXO18Q8NFZ0 1043 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EZH1Q92800 747 aaPredicted RBP6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NELL2Q99435 816 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 REEP2Q9BRK0 252 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FOXP1Q9H334 677 aaPredicted RBP6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZHX3Q9H4I2 956 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EBF3Q9H4W6 596 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TRPV4Q9HBA0 871 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 IL21Q9HBE4 155 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HPS4Q9NQG7 708 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NOL7Q9UMY1 257 aaKnown RBP6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DNM3Q9UQ16 869 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 INVSQ9Y283 1065 aa6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DSPP15924 2871 aaKnown RBP6.51□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HELZP42694 1942 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LOC400499M0QZD8 3231 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DPYSL4O14531 572 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GIPC1O14908 333 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CLDN3O15551 220 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RNF40O75150 1001 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RPP40O75818 363 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TOP3BO95985 862 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CLTAP09496 248 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PLA2G4BP0C869 781 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CCDC192P0DO97 292 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ODC1P11926 461 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HOXB3P14651 431 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ACAT1P24752 427 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DDIT3P35638 169 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ALDH1A3P47895 512 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ACOT2P49753 483 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EPHB3P54753 998 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SLC12A3P55017 1021 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TMEM132DQ14C87 1099 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CSRP2Q16527 193 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TMEM119Q4V9L6 283 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZC2HC1CQ53FD0 456 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARSHQ5FYA8 562 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 N4BP2L1Q5TBK1 243 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 C9orf57Q5W0N0 161 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 WSCD1Q658N2 575 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CENPPQ6IPU0 288 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PSAPL1Q6NUJ1 521 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DNAJB7Q7Z6W7 309 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TMEM150AQ86TG1 271 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LONP2Q86WA8 852 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SFTPA1Q8IWL2 248 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EFCAB13Q8IY85 973 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CELF5Q8N6W0 485 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MAB21L3Q8N8X9 362 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 C12orf50Q8NA57 414 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FAM184AQ8NB25 1140 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZSWIM2Q8NEG5 633 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 USP13Q92995 863 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PSMG2Q969U7 264 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CHAMP1Q96JM3 812 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SENP8Q96LD8 212 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 KIF2CQ99661 725 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PYM1Q9BRP8 204 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FAM126AQ9BYI3 521 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TMEM134Q9H6X4 195 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FBRSL1Q9HCM7 1045 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TRPC7Q9HCX4 862 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZDHHC4Q9NPG8 344 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TMLHEQ9NVH6 421 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MAGED2Q9UNF1 606 aaPredicted RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LIMCH1Q9UPQ0 1083 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ASCC3Q8N3C0 2202 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NUP205Q92621 2012 aa6.5□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LAMA5O15230 3695 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 OR6C75A6NL08 312 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ANKRD63C9JTQ0 380 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TM4SF5O14894 197 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CHADO15335 359 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MICAL2O94851 1124 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 OAZ2O95190 189 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CD2BP2O95400 341 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms