RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 XKR4Q5GH76 650 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 PHLDB3Q6NSJ2 640 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 GJB7Q6PEY0 223 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 SLC38A7Q9NVC3 462 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 PCDHA13Q9Y5I0 950 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 SCN5AQ14524 2016 aa16.9■□□□□ 0.3
SNX17-204ENST00000453453 SMIM28A0A1B0GU29 152 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 SSU72P8A0A1W2PR75 194 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 ITGB3P05106 788 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 IBSPP21815 317 aaPredicted RBP16.89■□□□□ 0.29
SNX17-204ENST00000453453 TBXAS1P24557 533 aaPredicted RBP16.89■□□□□ 0.29
SNX17-204ENST00000453453 ATICP31939 592 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 HNRNPH1P31943 449 aaKnown RBP16.89■□□□□ 0.29
SNX17-204ENST00000453453 NOP14P78316 857 aaKnown RBP16.89■□□□□ 0.29
SNX17-204ENST00000453453 RBP5P82980 135 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 GCNT1Q02742 428 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 ASIC2Q16515 512 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 ARHGAP44Q17R89 818 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 ZNF699Q32M78 642 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 CCDC181Q5TID7 509 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 ECHDC2Q86YB7 292 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 ARHGEF19Q8IW93 802 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 C1orf127Q8N9H9 656 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 DBF4BQ8NFT6 615 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 SCLYQ96I15 445 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 PI4K2AQ9BTU6 479 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 WNT8AQ9H1J5 351 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 TSPYL2Q9H2G4 693 aaPredicted RBP16.89■□□□□ 0.29
SNX17-204ENST00000453453 RSAD1Q9HA92 442 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 LUC7LQ9NQ29 371 aaKnown RBP16.89■□□□□ 0.29
SNX17-204ENST00000453453 PRDM5Q9NQX1 630 aaPredicted RBP16.89■□□□□ 0.29
SNX17-204ENST00000453453 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.89■□□□□ 0.293e-7■■■■■ 153.3
SNX17-204ENST00000453453 GDF3Q9NR23 364 aa16.89■□□□□ 0.29
SNX17-204ENST00000453453 ZNF185O15231 689 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 EOMESO95936 686 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 ASS1P00966 412 aaKnown RBP16.88■□□□□ 0.29
SNX17-204ENST00000453453 CXCL10P02778 98 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 FERP16591 822 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
SNX17-204ENST00000453453 CYP3A5P20815 502 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 POLR2BP30876 1174 aaKnown RBP16.88■□□□□ 0.29
SNX17-204ENST00000453453 JAM2P57087 298 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 MYL6P60660 151 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 DRAP1Q14919 205 aaPredicted RBP16.88■□□□□ 0.29
SNX17-204ENST00000453453 GLRA4Q5JXX5 417 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 C8orf74Q6P047 294 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 WHAMMQ8TF30 809 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 LPPQ93052 612 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 CABS1Q96KC9 395 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 LRRC1Q9BTT6 524 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 HMGB1P1B2RPK0 211 aaPredicted RBP16.88■□□□□ 0.29
SNX17-204ENST00000453453 C9IYK1 514 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 F8VZ95 297 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 CES2O00748 559 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 NDUFAB1O14561 156 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 P4HA1P13674 534 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 SOX5P35711 763 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 MLH1P40692 756 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 LIG3P49916 1009 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 MYO1EQ12965 1108 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 ZBTB6Q15916 424 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 CFAP221Q4G0U5 840 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 TTMPQ5BVD1 217 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 AGMOQ6ZNB7 445 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 GSPT2Q8IYD1 628 aaKnown RBP16.88■□□□□ 0.29
SNX17-204ENST00000453453 ARFGAP2Q8N6H7 521 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 ZMAT2Q96NC0 199 aaKnown RBP16.88■□□□□ 0.29
SNX17-204ENST00000453453 GAD1Q99259 594 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 EPN3Q9H201 632 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 PLEKHA4Q9H4M7 779 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 AIPL1Q9NZN9 384 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
SNX17-204ENST00000453453 TDRD15B5MCY1 1934 aaKnown RBP16.87■□□□□ 0.29
SNX17-204ENST00000453453 MACROD2A1Z1Q3 448 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 ARL5CA6NH57 179 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 RBAK-RBAKDNI3L0D1 243 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 KIAA0355O15063 1070 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 LRRN2O75325 713 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 TIMP1P01033 207 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 CST3P01034 146 aaPredicted RBP16.87■□□□□ 0.29
SNX17-204ENST00000453453 SERPING1P05155 500 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 RAG1P15918 1043 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 ATF7P17544 494 aaPredicted RBP16.87■□□□□ 0.29
SNX17-204ENST00000453453 FNTAP49354 379 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 KIF11P52732 1056 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 YWHAEP62258 255 aaKnown RBP16.87■□□□□ 0.29
SNX17-204ENST00000453453 CUL2Q13617 745 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 CFAP58Q5T655 872 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 LRIG3Q6UXM1 1119 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 DEFB128Q7Z7B8 93 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 IQCKQ8N0W5 287 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 OTUD6BQ8N6M0 293 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 HELQQ8TDG4 1101 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 TATDN2Q93075 761 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 NIF3L1Q9GZT8 377 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 TUBGCP4Q9UGJ1 667 aa16.87■□□□□ 0.29
SNX17-204ENST00000453453 DMGDHQ9UI17 866 aaKnown RBP16.87■□□□□ 0.29
SNX17-204ENST00000453453 SIX4Q9UIU6 781 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms