RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 LILRA4P59901 499 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 MYL5Q02045 173 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 DSG1Q02413 1049 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 BIRC3Q13489 604 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 AGERQ15109 404 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ZSCAN23Q3MJ62 389 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 KRT39Q6A163 491 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 KIAA1841Q6NSI8 718 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ELMSAN1Q6PJG2 1045 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 C15orf39Q6ZRI6 1047 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ANKS3Q6ZW76 656 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 DPH6Q7L8W6 267 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 TMC7Q7Z402 723 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 PPFIBP1Q86W92 1011 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 TMEM173Q86WV6 379 aaPredicted RBP9.37□□□□□ -0.91
COL28A1-205ENST00000453441 VPS52Q8N1B4 723 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ANKRD20A12PQ8NF67 263 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 GDPD5Q8WTR4 605 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 PIK3R5Q8WYR1 880 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 FOXJ1Q92949 421 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 TCF25Q9BQ70 676 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 PAAF1Q9BRP4 392 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ANP32EQ9BTT0 268 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 TTPALQ9BTX7 342 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 EMILIN2Q9BXX0 1053 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ZBP1Q9H171 429 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 FAM124BQ9H5Z6 455 aaPredicted RBP9.37□□□□□ -0.91
COL28A1-205ENST00000453441 NSUN3Q9H649 340 aaKnown RBP9.37□□□□□ -0.91
COL28A1-205ENST00000453441 VRTNQ9H8Y1 702 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 CERS4Q9HA82 394 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 GOLGA2P5Q9HBQ8 144 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ALG13Q9NP73 1137 aaKnown RBP9.37□□□□□ -0.91
COL28A1-205ENST00000453441 ENTPD7Q9NQZ7 604 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 MRPL17Q9NRX2 175 aaKnown RBP9.37□□□□□ -0.91
COL28A1-205ENST00000453441 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 MTMR10Q9NXD2 777 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 FNIP2Q9P278 1114 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 DPP7Q9UHL4 492 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 AGAP1Q9UPQ3 857 aa9.37□□□□□ -0.91
COL28A1-205ENST00000453441 TRANK1O15050 2925 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 SYCE3A1L190 88 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 KPNA7A9QM74 516 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 RBAK-RBAKDNI3L0D1 243 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 C4BPAP04003 597 aaKnown RBP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 CYP11A1P05108 521 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 TPM2P07951 284 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 KRT19P08727 400 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 SRGAP2BP0DMP2 458 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 P4HA1P13674 534 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 FOSL2P15408 326 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 TPM4P67936 248 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 NCOA4Q13772 614 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 NR6A1Q15406 480 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 SGSM1Q2NKQ1 1148 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 FAM171A1Q5VUB5 890 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 TCERG1LQ5VWI1 586 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 DSTYKQ6XUX3 929 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 SV2AQ7L0J3 742 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 METTL23Q86XA0 190 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 TRIM59Q8IWR1 403 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 TMEM86AQ8N2M4 240 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 TTC39CQ8N584 583 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 TOP6BLQ8N6T0 577 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 MRPL43Q8N983 215 aaKnown RBP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 C3orf58Q8NDZ4 430 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 OR5B17Q8NGF7 314 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 CXorf38Q8TB03 319 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 PLEKHO2Q8TD55 490 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 MICAL1Q8TDZ2 1067 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 BCL7CQ8WUZ0 217 aaPredicted RBP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 SLC35C1Q96A29 364 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 HPDLQ96IR7 371 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 CNOT6LQ96LI5 555 aaKnown RBP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 CDX2Q99626 313 aaPredicted RBP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 FUCA2Q9BTY2 467 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 DNAI2Q9GZS0 605 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 GZF1Q9H116 711 aaPredicted RBP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 RXFP1Q9HBX9 757 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 GDAP2Q9NXN4 497 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 CHD7Q9P2D1 2997 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 NFE2L3Q9Y4A8 694 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL28A1-205ENST00000453441 BACE2Q9Y5Z0 518 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 WASF2Q9Y6W5 498 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 SCN1AP35498 2009 aa9.36□□□□□ -0.91
COL28A1-205ENST00000453441 PTPRJQ12913 1337 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 PRRC2BQ5JSZ5 2229 aaKnown RBP9.35□□□□□ -0.91
COL28A1-205ENST00000453441 GTPBP10A4D1E9 387 aaKnown RBP9.35□□□□□ -0.91
COL28A1-205ENST00000453441 EPOPA6NHQ4 379 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 AXIN1O15169 862 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 HUS1O60921 280 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 OAZ2O95190 189 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 CXCL14O95715 111 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 AFPP02771 609 aaKnown RBP9.35□□□□□ -0.91
COL28A1-205ENST00000453441 ADH1AP07327 375 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 PIK3CAP42336 1068 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 NDUFV1P49821 464 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 ZNF165P49910 485 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms