RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
VPS8-213ENST00000453056 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
VPS8-213ENST00000453056 BORCS6Q96GS4 357 aa16.66■□□□□ 0.26
VPS8-213ENST00000453056 MKNK1Q9BUB5 465 aa16.66■□□□□ 0.26
VPS8-213ENST00000453056 INSL5Q9Y5Q6 135 aa16.66■□□□□ 0.26
VPS8-213ENST00000453056 LRRIQ3A6PVS8 624 aaPredicted RBP16.65■□□□□ 0.26
VPS8-213ENST00000453056 PCSK1P29120 753 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 ATICP31939 592 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 TNNC1P63316 161 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 CLDN10P78369 228 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 SMARCB1Q12824 385 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 GPR17Q13304 367 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 CENPPQ6IPU0 288 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
VPS8-213ENST00000453056 ADSSL1Q8N142 457 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 DHTKD1Q96HY7 919 aaPredicted RBP16.65■□□□□ 0.26
VPS8-213ENST00000453056 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 L1RE1Q9UN81 338 aa16.65■□□□□ 0.26
VPS8-213ENST00000453056 IKBKBO14920 756 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 AKAP3O75969 853 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 OR4Q2P0C623 313 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 LHX1P48742 406 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 VAMP7P51809 220 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 FKBP3Q00688 224 aaKnown RBP16.64■□□□□ 0.25
VPS8-213ENST00000453056 RNF19BQ6ZMZ0 732 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 DPH6Q7L8W6 267 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 TRIML1Q8N9V2 468 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 OR10T2Q8NGX3 314 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 PLEKHO2Q8TD55 490 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 C2orf15Q8WU43 125 aaKnown RBP16.64■□□□□ 0.25
VPS8-213ENST00000453056 PGLYRP2Q96PD5 576 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 ZCWPW1Q9H0M4 648 aa16.64■□□□□ 0.25
VPS8-213ENST00000453056 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
VPS8-213ENST00000453056 BICDL2A1A5D9 508 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 MTMR11A4FU01 709 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 C2CD4DB7Z1M9 353 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 BIN1O00499 593 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 SLC16A3O15427 465 aaKnown RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 DCXO43602 365 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 STAU1O95793 577 aaKnown RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 P4HA1P13674 534 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 ALADP13716 330 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 FSHRP23945 695 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 CCNE1P24864 410 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 NCOA4Q13772 614 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 MORC3Q14149 939 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 NFE2Q16621 373 aaPredicted RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 ZNF699Q32M78 642 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 PABPC1LQ4VXU2 614 aaKnown RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 SLC39A12Q504Y0 691 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 TDRD10Q5VZ19 366 aaKnown RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 ISM2Q6H9L7 571 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 IQCEQ6IPM2 695 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 KLHL10Q6JEL2 608 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 GET4Q7L5D6 327 aaPredicted RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 GRASPQ7Z6J2 395 aaPredicted RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 ZDHHC14Q8IZN3 488 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 MMS19Q96T76 1030 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 IMPG2Q9BZV3 1241 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 DDX43Q9NXZ2 648 aaKnown RBP16.63■□□□□ 0.25
VPS8-213ENST00000453056 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
VPS8-213ENST00000453056 NOTCH4Q99466 2003 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 STX10O60499 249 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 SEC24AO95486 1093 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 GBP2P32456 591 aaPredicted RBP16.62■□□□□ 0.25
VPS8-213ENST00000453056 PIK3CAP42336 1068 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 ALDH1A3P47895 512 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 MYL6P60660 151 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 TWF1Q12792 350 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 CAMK4Q16566 473 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 ZACNQ401N2 412 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 FEZF2Q8TBJ5 459 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 SPPL2BQ8TCT7 592 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 ZNF516Q92618 1163 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 TMEM209Q96SK2 561 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 ACBD6Q9BR61 282 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPS8-213ENST00000453056 KIAA1468Q9P260 1216 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 HSFX1Q9UBD0 423 aa16.62■□□□□ 0.25
VPS8-213ENST00000453056 C4BPAP04003 597 aaKnown RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 TRIM49P0CI25 452 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 TRIM49CP0CI26 452 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 WARSP23381 471 aaKnown RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 GTF2H1P32780 548 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 TUFMP49411 452 aaKnown RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 EPHB3P54753 998 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 DLG4P78352 724 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 DUSP4Q13115 394 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 PAK1Q13153 545 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 SOWAHAQ2M3V2 549 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 WDR72Q3MJ13 1102 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 ZNF667Q5HYK9 610 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 INTS6LQ5JSJ4 861 aaKnown RBP16.61■□□□□ 0.25
VPS8-213ENST00000453056 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 FOXR2Q6PJQ5 311 aa16.61■□□□□ 0.25
VPS8-213ENST00000453056 SV2AQ7L0J3 742 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms