RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PDCL2Q8N4E4 241 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 GPT2Q8TD30 523 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 SUSD6Q92537 303 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 EEF2KMTQ96G04 330 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 ACBD6Q9BR61 282 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 PHF7Q9BWX1 381 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-203ENST00000452013 SRRTQ9BXP5 876 aaKnown RBP9.53□□□□□ -0.88
COL8A1-203ENST00000452013 PRKD2Q9BZL6 878 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 IMPG2Q9BZV3 1241 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 GZF1Q9H116 711 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-203ENST00000452013 SNX25Q9H3E2 840 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 CYP4F11Q9HBI6 524 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 TMEM8AQ9HCN3 771 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 DDX43Q9NXZ2 648 aaKnown RBP9.53□□□□□ -0.88
COL8A1-203ENST00000452013 RWDD2AQ9UIY3 292 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 CTNND2Q9UQB3 1225 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 RALGAPA2Q2PPJ7 1873 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 GBF1Q92538 1859 aa9.53□□□□□ -0.88
COL8A1-203ENST00000452013 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 WDR27A2RRH5 827 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 GABRDO14764 452 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 TACC1O75410 805 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 RFPL2O75678 378 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 PAPLNO95428 1278 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 LRG1P02750 347 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 POU2F2P09086 479 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 PCSK1P29120 753 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 GNL1P36915 607 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 GCLMP48507 274 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 TUFMP49411 452 aaKnown RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 STX17P56962 302 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ADCY1Q08828 1119 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 NFE2Q16621 373 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 TPD52L1Q16890 204 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 SOWAHAQ2M3V2 549 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ZNF699Q32M78 642 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ZNF667Q5HYK9 610 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 TDRD10Q5VZ19 366 aaKnown RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 SASS6Q6UVJ0 657 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ADHFE1Q8IWW8 467 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ADGRF2Q8IZF7 708 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ELMOD1Q8N336 334 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 SLC7A14Q8TBB6 771 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ADAMTS19Q8TE59 1207 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 C2orf15Q8WU43 125 aaKnown RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 SMG7Q92540 1137 aaKnown RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 FAM84AQ96KN4 292 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 UHRF1Q96T88 793 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 DUSP9Q99956 384 aaKnown RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 ZCWPW1Q9H0M4 648 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 MMRN2Q9H8L6 949 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 HSFX1Q9UBD0 423 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
COL8A1-203ENST00000452013 L1RE1Q9UN81 338 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 NR2E1Q9Y466 385 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 SZT2Q5T011 3432 aa9.52□□□□□ -0.89
COL8A1-203ENST00000452013 VNN1O95497 513 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 HLA-DRAP01903 254 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 TRIM49P0CI25 452 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 TRIM49CP0CI26 452 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 CCDC192P0DO97 292 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 PTPN2P17706 415 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 TRIM21P19474 475 aaKnown RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 WARSP23381 471 aaKnown RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 ERCC5P28715 1186 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 CLCN1P35523 988 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 PIK3CAP42336 1068 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 ALDH1A3P47895 512 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 PPP3CAQ08209 521 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 CETN1Q12798 172 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 DUSP4Q13115 394 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 PLD1Q13393 1074 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 SLC39A12Q504Y0 691 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 DCAF17Q5H9S7 520 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 WDR44Q5JSH3 913 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 C1orf220Q5T0J3 134 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 CCDC183Q5T5S1 534 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 IQCEQ6IPM2 695 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 LIMS2Q7Z4I7 341 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 GJD3Q8N144 294 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 FBXL13Q8NEE6 735 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 OR6B3Q8NGW1 331 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 SPPL2BQ8TCT7 592 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 ACSF2Q96CM8 615 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 TRIM44Q96DX7 344 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 FAXDC2Q96IV6 333 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 ZNF512Q96ME7 567 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 XYLT2Q9H1B5 865 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 WDR6Q9NNW5 1121 aaKnown RBP9.51□□□□□ -0.89
COL8A1-203ENST00000452013 RAB20Q9NX57 234 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 CDH9Q9ULB4 789 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 POLIQ9UNA4 740 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 PCDHB5Q9Y5E4 795 aa9.51□□□□□ -0.89
COL8A1-203ENST00000452013 A8MXQ7 604 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms