RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 PCDHGA2Q9Y5H1 932 aa5.59□□□□□ -1.51
GTF3C3-207ENST00000451088 KIAA1210Q9ULL0 1709 aa5.59□□□□□ -1.51
GTF3C3-207ENST00000451088 ADGRB1O14514 1584 aa5.59□□□□□ -1.52
GTF3C3-207ENST00000451088 BRD4O60885 1362 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 RGPD5Q99666 1765 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 WDR17Q8IZU2 1322 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 FAM171A2A8MVW0 826 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 HLA-DOAP06340 250 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 FPR1P21462 350 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 ALDH1A3P47895 512 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 HECTD2Q5U5R9 776 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 ARMC6Q6NXE6 501 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 BEND2Q8NDZ0 799 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 OR2I1PQ8NGU4 316 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 GPR150Q8NGU9 434 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 STON2Q8WXE9 905 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 ZG16BQ96DA0 208 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 CYFIP2Q96F07 1278 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 SENP6Q9GZR1 1112 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 PUS7LQ9H0K6 701 aaKnown RBP5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 KLHL11Q9NVR0 708 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 SLC23A1Q9UHI7 598 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 MCM8Q9UJA3 840 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 AJAP1Q9UKB5 411 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 ATP11BQ9Y2G3 1177 aa5.58□□□□□ -1.52
GTF3C3-207ENST00000451088 NHSQ6T4R5 1651 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 ACEP12821 1306 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 PIPSLA2A3N6 862 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 TEX33O43247 280 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 LMNAP02545 664 aaKnown RBP5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 ELANEP08246 267 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 ATP5JP18859 108 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 TGM1P22735 817 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 DDX6P26196 483 aaKnown RBP eCLIP5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 PCSK1P29120 753 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 WASP42768 502 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 GUCY1B3Q02153 619 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 UBXN2BQ14CS0 331 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 SEM1Q6ZVN7 128 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 NECAB2Q7Z6G3 386 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 DDX42Q86XP3 938 aaKnown RBP eCLIP5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 CBARPQ8N350 705 aaPredicted RBP5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 OR56A1Q8NGH5 318 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 LINC00476Q8WZB0 136 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 FUBP3Q96I24 572 aaKnown RBP eCLIP5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 COQ10AQ96MF6 247 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 CYP4F11Q9HBI6 524 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 SPC25Q9HBM1 224 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 TMEM140Q9NV12 185 aa5.57□□□□□ -1.52
GTF3C3-207ENST00000451088 SBF1O95248 1867 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 CENPJQ9HC77 1338 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 A0A0G2JLW4 131 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 POMCP01189 267 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 RAP2AP10114 183 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 EGR2P11161 476 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 GCSHP23434 173 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 USP14P54578 494 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 RAP2BP61225 183 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 ATP8B2P98198 1209 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 RESTQ13127 1097 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 MTM1Q13496 603 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 TP53BP2Q13625 1128 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 ABHD17BQ5VST6 288 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 SMIM5Q71RC9 77 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 MED25Q71SY5 747 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 FUBP1Q96AE4 644 aaKnown RBP5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 SLC2A13Q96QE2 648 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 CDK19Q9BWU1 502 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 LDAHQ9H6V9 325 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 SLC5A4Q9NY91 659 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 ATP8A1Q9Y2Q0 1164 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 MAP3K2Q9Y2U5 619 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 COL18A1P39060 1754 aa5.56□□□□□ -1.52
GTF3C3-207ENST00000451088 POLR3AO14802 1390 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 UNC119BA6NIH7 251 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 SPDEFO95238 335 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 AMY1AP04745 511 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 VEGFAP15692 232 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 AVPR1BP47901 424 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 BLOC1S1P78537 153 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 OCA2Q04671 838 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 SCAPQ12770 1279 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 TSHZ3Q63HK5 1081 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 B3GNTL1Q67FW5 361 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 MAPKAPK5Q8IW41 473 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 DNAJC10Q8IXB1 793 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 AMOTL1Q8IY63 956 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 TMEM132CQ8N3T6 1108 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 LCORLQ8N3X6 602 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 PHACTR3Q96KR7 559 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 MYOCQ99972 504 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 REXO4Q9GZR2 422 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 FBXO34Q9NWN3 711 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 CCNL1Q9UK58 526 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 DNM3Q9UQ16 869 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 ACTL7AQ9Y615 435 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 EPN1Q9Y6I3 576 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 WNK3Q9BYP7 1800 aa5.55□□□□□ -1.52
GTF3C3-207ENST00000451088 CASP8AP2Q9UKL3 1982 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms