RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 MTIF2P46199 727 aaKnown RBP11.41□□□□□ -0.58
SMPD4-211ENST00000449159 RAP1GAPP47736 663 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 NDUFV1P49821 464 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 CDR1P51861 262 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 NOP14P78316 857 aaKnown RBP11.41□□□□□ -0.58
SMPD4-211ENST00000449159 MYL7Q01449 175 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 MYL5Q02045 173 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 DLX2Q07687 328 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-211ENST00000449159 KCNH2Q12809 1159 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 KCNC3Q14003 757 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 KCNJ12Q14500 433 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 COL19A1Q14993 1142 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 WDR72Q3MJ13 1102 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 CTXN3Q4LDR2 81 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 CDKAL1Q5VV42 579 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 ZNF280DQ6N043 979 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 SPATA31D4Q6ZUB0 917 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 LIMS2Q7Z4I7 341 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 OSTM1Q86WC4 334 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 PALB2Q86YC2 1186 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 DHX40Q8IX18 779 aaKnown RBP11.41□□□□□ -0.58
SMPD4-211ENST00000449159 GPR65Q8IYL9 337 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 ADGRF2Q8IZF7 708 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 EFHBQ8N7U6 833 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 FBXL13Q8NEE6 735 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 OR10T2Q8NGX3 314 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 KBTBD7Q8WVZ9 684 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 PPP2R3CQ969Q6 453 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 TMEM209Q96SK2 561 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 EMILIN2Q9BXX0 1053 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 HSD3B7Q9H2F3 369 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 SMYD3Q9H7B4 428 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 APOBEC3GQ9HC16 384 aaKnown RBP11.41□□□□□ -0.58
SMPD4-211ENST00000449159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD4-211ENST00000449159 FANCLQ9NW38 375 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 FNIP2Q9P278 1114 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 FBXL5Q9UKA1 691 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 SSX2IPQ9Y2D8 614 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 NME7Q9Y5B8 376 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD4-211ENST00000449159 BACE2Q9Y5Z0 518 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 HCFC2Q9Y5Z7 792 aa11.41□□□□□ -0.58
SMPD4-211ENST00000449159 WDR27A2RRH5 827 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 PRR33A8MZF0 331 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 TGM5O43548 720 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 HUS1O60921 280 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 AFPP02771 609 aaKnown RBP11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ADH1AP07327 375 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 OR4Q2P0C623 313 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 PAX3P23760 479 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ACAT1P24752 427 aaKnown RBP11.4□□□□□ -0.58
SMPD4-211ENST00000449159 LTBRP36941 435 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ZNF165P49910 485 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 CLCN4P51793 760 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ARPP19P56211 112 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 TNNC1P63316 161 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ROR1Q01973 937 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 CREMQ03060 361 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ADAM15Q13444 863 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 CCDC142Q17RM4 750 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 CTC1Q2NKJ3 1217 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 SGSM1Q2NKQ1 1148 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 TCP11X2Q5H9J9 407 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ZNF667Q5HYK9 610 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 PTCRAQ6ISU1 281 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-211ENST00000449159 PDXDC1Q6P996 788 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 EP400NLQ6ZTU2 488 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 FAM114A1Q8IWE2 563 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 TOP6BLQ8N6T0 577 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 FEZF2Q8TBJ5 459 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 SLC22A17Q8WUG5 538 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 MMS19Q96T76 1030 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 CDCA3Q99618 268 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-211ENST00000449159 BPIFA3Q9BQP9 254 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 MRPL45Q9BRJ2 306 aaKnown RBP11.4□□□□□ -0.58
SMPD4-211ENST00000449159 NAT10Q9H0A0 1025 aaKnown RBP11.4□□□□□ -0.58
SMPD4-211ENST00000449159 SDCBP2Q9H190 292 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 CD320Q9NPF0 282 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 RAB20Q9NX57 234 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 CLDND1Q9NY35 253 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 DSEQ9UL01 958 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-211ENST00000449159 COQ4Q9Y3A0 265 aa11.4□□□□□ -0.58
SMPD4-211ENST00000449159 ZNF318Q5VUA4 2279 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-211ENST00000449159 ARHGEF37A1IGU5 675 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 H7C4K7 107 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 VNN2O95498 520 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 GLUD1P00367 558 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 IL9P15248 144 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 LMO2P25791 158 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 ASPAP45381 313 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 CDH8P55286 799 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 IQCB1Q15051 598 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 KRT31Q15323 416 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
SMPD4-211ENST00000449159 MIIPQ5JXC2 388 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 SLC8B1Q6J4K2 584 aa11.39□□□□□ -0.59
SMPD4-211ENST00000449159 LILRA6Q6PI73 481 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms