RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TOMM70O94826 608 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 CTNNA2P26232 953 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 HOXD10P28358 340 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 CTGFP29279 349 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 HOXA11P31270 313 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 USP46P62068 366 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 VSNL1P62760 191 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 TMEM62Q0P6H9 643 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 MON1BQ7L1V2 547 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 CPA5Q8WXQ8 436 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 HPDLQ96IR7 371 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 DNAI2Q9GZS0 605 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 RBM12Q9NTZ6 932 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 OGFRQ9NZT2 677 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 TMEM59LQ9UK28 342 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 NOC2LQ9Y3T9 749 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 MYO1FO00160 1098 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 WEE2P0C1S8 567 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 COMTP21964 271 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 FGFR4P22455 802 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 POLR2BP30876 1174 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 SP3Q02447 781 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 TAP1Q03518 808 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 LONRF2Q1L5Z9 754 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 SCARA5Q6ZMJ2 495 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 HDXQ7Z353 690 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 DNAJC5GQ8N7S2 189 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 TRPV1Q8NER1 839 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 SNX27Q96L92 541 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 ZSWIM1Q9BR11 485 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 LRRC1Q9BTT6 524 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 CELF4Q9BZC1 486 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 LHX5Q9H2C1 402 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 ACBD3Q9H3P7 528 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 PARVAQ9NVD7 372 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 ZNF446Q9NWS9 450 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 STIM2Q9P246 746 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 GTF2IRD1Q9UHL9 959 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 ANAPC7Q9UJX3 599 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 KIAA1257Q9ULG3 409 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 STRIP2Q9ULQ0 834 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 GABRQQ9UN88 632 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 AGAP1Q9UPQ3 857 aa11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-203ENST00000448935 TRIP12Q14669 1992 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 SCN10AQ9Y5Y9 1956 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 TMEM110-MUSTN1A8MSY1 372 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 KRIT1O00522 736 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 HOXA2O43364 376 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 CD4P01730 458 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 MMP8P22894 467 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 RRM1P23921 792 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 TNFRSF8P28908 595 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 CTNNA1P35221 906 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 APLP1P51693 650 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 PRKCZQ05513 592 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 GPS2Q13227 327 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 PLEKHA7Q6IQ23 1121 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 IFT20Q8IY31 132 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 LRRC52Q8N7C0 313 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 CCDC26Q8TAB7 109 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 CXorf38Q8TB03 319 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 ZIC5Q96T25 663 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 C11orf70Q9BRQ4 267 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 SLITRK6Q9H5Y7 841 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 SNTG2Q9NY99 539 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 CNTN3Q9P232 1028 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 UBQLN1Q9UMX0 589 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 PCDHA3Q9Y5H8 950 aa11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 PDCD11Q14690 1871 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-203ENST00000448935 A0A0U1RQG5 324 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 MEFVO15553 781 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 VDRP11473 427 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 CD19P15391 556 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 RWDD2BP57060 319 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 MRPS6P82932 125 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 INCA1Q0VD86 236 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 STILQ15468 1287 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 ZNF394Q53GI3 561 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 CCNI2Q6ZMN8 369 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 MAATS1Q7Z4T9 603 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 SESTD1Q86VW0 696 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 ERICH1Q86X53 443 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 PASD1Q8IV76 773 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
VIPAS39-203ENST00000448935 KRT222Q8N1A0 295 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms