RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SMYD4Q8IYR2 804 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 SUMF1Q8NBK3 374 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 SMARCD2Q92925 531 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 E2F7Q96AV8 911 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 TCEAL4Q96EI5 215 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 CCDC34Q96HJ3 373 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 ASB16Q96NS5 453 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 FIZ1Q96SL8 496 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 FAM126AQ9BYI3 521 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 PARVGQ9HBI0 331 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 HEBP1Q9NRV9 189 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 EXOC1Q9NV70 894 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 ZSCAN32Q9NX65 697 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 KIAA1468Q9P260 1216 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 UBQLN1Q9UMX0 589 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 WDR87Q6ZQQ6 2873 aa14.88□□□□□ -0.03
PDLIM2-213ENST00000448520 DCHS1Q96JQ0 3298 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 PDCD11Q14690 1871 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 GPR179Q6PRD1 2367 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 PVALEFA0A1B0GWK0 134 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 SYCE3A1L190 88 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 MEFVO15553 781 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 SMC2O95347 1197 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 CPB1P15086 417 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 PSMC3P17980 439 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 BMP6P22004 513 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 TARSP26639 723 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 ABCD1P33897 745 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 EPHA5P54756 1037 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 NCKAP1LP55160 1127 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 TWF1Q12792 350 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 PLD1Q13393 1074 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 SEZ6Q53EL9 994 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 HAUS6Q7Z4H7 955 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 USP37Q86T82 979 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 CD302Q8IX05 232 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 KIAA2013Q8IYS2 634 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 GPR161Q8N6U8 529 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 ZBTB44Q8NCP5 570 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 KIAA0895Q8NCT3 520 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 BEST2Q8NFU1 509 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 SPATA20Q8TB22 786 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 DEPDC1BQ8WUY9 529 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 SYAP1Q96A49 352 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 KIF12Q96FN5 646 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 BICD1Q96G01 975 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 IER2Q9BTL4 223 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 TRPV4Q9HBA0 871 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 SLC39A2Q9NP94 309 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 ASAH2Q9NR71 780 aa14.87□□□□□ -0.03
PDLIM2-213ENST00000448520 OR6C75A6NL08 312 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 MYL1P05976 194 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 ADRB2P07550 413 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 CXCL8P10145 99 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 GAP43P17677 238 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 FCARP24071 287 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 CCR2P41597 374 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 AARSP49588 968 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 LIG4P49917 911 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 MLLT6P55198 1093 aaPredicted RBP14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 PPP2R3AQ06190 1150 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 STK4Q13043 487 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 FZD5Q13467 585 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 PUM1Q14671 1186 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 PPP2R5DQ14738 602 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 ZSCAN23Q3MJ62 389 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 ZC2HC1CQ53FD0 456 aaPredicted RBP14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 FAM26FQ5R3K3 315 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 RNF19BQ6ZMZ0 732 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 MAP4K3Q8IVH8 894 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 MFSD6LQ8IWD5 586 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 NELL1Q92832 810 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 SECISBP2LQ93073 1101 aaKnown RBP14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 IKZF4Q9H2S9 585 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 RPF1Q9H9Y2 349 aaKnown RBP14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 ZNF334Q9HCZ1 680 aaPredicted RBP14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 CEP72Q9P209 647 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 TUBGCP4Q9UGJ1 667 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 MAPK8IP1Q9UQF2 711 aa14.86□□□□□ -0.03
PDLIM2-213ENST00000448520 CEP250Q9BV73 2442 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 LACTBL1A8MY62 500 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 K7ENM7 598 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 ZNF263O14978 683 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 OGTO15294 1046 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 MOSPD3O75425 235 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 RHOBTB3O94955 611 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 PIGRP01833 764 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 MYL4P12829 197 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 TYMPP19971 482 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 ALDH1A3P47895 512 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 EPHB3P54753 998 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 NRLP54845 237 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 GPR17Q13304 367 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 MORC3Q14149 939 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 MYBPC2Q14324 1141 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 KCNB1Q14721 858 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 C1orf228Q6PIY5 440 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 DSTYKQ6XUX3 929 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 HS6ST3Q8IZP7 471 aa14.85□□□□□ -0.03
PDLIM2-213ENST00000448520 RMDN1Q96DB5 314 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms