RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PLEKHA7Q6IQ23 1121 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 PPP1R2P3Q6NXS1 205 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 DNAJC24Q6P3W2 148 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 CCDC105Q8IYK2 499 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 C7orf31Q8N865 590 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 FAM71BQ8TC56 605 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 USP6NLQ92738 828 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 MCEEQ96PE7 176 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 TWNKQ96RR1 684 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 BCO2Q9BYV7 579 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 GJD2Q9UKL4 321 aa10.11□□□□□ -0.79
COL6A4P1-201ENST00000446690 GOLGA8SH3BPF8 625 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 O00370 1275 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 RNF40O75150 1001 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 MYCNP04198 464 aaPredicted RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLC10A3P09131 477 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 C6orf222P0C671 652 aaPredicted RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 HSPA6P17066 643 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 EIF4BP23588 611 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 AKAP5P24588 427 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 ATICP31939 592 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 KCNJ1P48048 391 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 YARSP54577 528 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 INHBEP58166 350 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 TAS2R40P59535 323 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 CDC42EP1Q00587 391 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 POU5F1Q01860 360 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 FSCN1Q16658 493 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 DCAF4L1Q3SXM0 396 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 NOTUMQ6P988 496 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLC27A1Q6PCB7 646 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 CCDC137Q6PK04 289 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 CXorf38Q8TB03 319 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 WHAMMQ8TF30 809 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 TMEM176AQ96HP8 235 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 APBA2Q99767 749 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 HEMGNQ9BXL5 484 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 RAB17Q9H0T7 212 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 NEUROG2Q9H2A3 272 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 SYNCQ9H7C4 482 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 ITGA11Q9UKX5 1188 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 PIN4Q9Y237 131 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 C17orf102A2RUQ5 167 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 DARSP14868 501 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 CTGFP29279 349 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 CHRNA3P32297 505 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 AARSP49588 968 aaKnown RBP eCLIP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 NNTQ13423 1086 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 CFAP58Q5T655 872 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 TTC27Q6P3X3 843 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 JAMLQ86YT9 394 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 RHOT1Q8IXI2 618 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 SLC4A11Q8NBS3 891 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 TMEM40Q8WWA1 233 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 C1orf54Q8WWF1 131 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 SOCS4Q8WXH5 440 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZIC5Q96T25 663 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZNF518BQ9C0D4 1074 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 ELOVL4Q9GZR5 314 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 NXF3Q9H4D5 531 aaKnown RBP10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 KLHL11Q9NVR0 708 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 KLK14Q9P0G3 267 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 IP6K2Q9UHH9 426 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 ADAM21Q9UKJ8 722 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 PCDHGC3Q9UN70 934 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 SNX24Q9Y343 169 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 C2CD2Q9Y426 696 aa10.1□□□□□ -0.79
COL6A4P1-201ENST00000446690 MBLAC1A4D2B0 266 aaPredicted RBP10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 ECHS1P30084 290 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 FLT3P36888 993 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 SREBF2Q12772 1141 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 MYO1EQ12965 1108 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 DHX34Q14147 1143 aaKnown RBP10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 ALS2CLQ60I27 953 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 UBA3Q8TBC4 463 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 C18orf25Q96B23 403 aaPredicted RBP10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 RNF25Q96BH1 459 aaPredicted RBP10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZMAT2Q96NC0 199 aaKnown RBP10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 ZIM3Q96PE6 472 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 ERP44Q9BS26 406 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 ARHGAP39Q9C0H5 1083 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 FAM114A2Q9NRY5 505 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 TJP2Q9UDY2 1190 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 PARP2Q9UGN5 583 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 CYTH4Q9UIA0 394 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 RASAL2Q9UJF2 1139 aa10.09□□□□□ -0.79
COL6A4P1-201ENST00000446690 MYADML2A6NDP7 307 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 TMEM191CA6NGB0 347 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 F8VP50 259 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PIK3R2O00459 728 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 CILPO75339 1184 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PAEPP09466 180 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 AKR1A1P14550 325 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 COILP38432 576 aaPredicted RBP10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 NDST1P52848 882 aa10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PSMC1P62191 440 aaKnown RBP10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 PTPN11Q06124 597 aaPredicted RBP10.08□□□□□ -0.8
COL6A4P1-201ENST00000446690 ATP13A4Q4VNC1 1196 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms