RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 MICALL1Q8N3F8 863 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 C12orf29Q8N999 325 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 RBBP8NLQ8NC74 664 aaPredicted RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 APPL2Q8NEU8 664 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 OR10T2Q8NGX3 314 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 PHOSPHO2Q8TCD6 241 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 MICAL1Q8TDZ2 1067 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 SLC20A1Q8WUM9 679 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 KBTBD7Q8WVZ9 684 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 GBF1Q92538 1859 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 TMEM169Q96HH4 297 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 UROC1Q96N76 676 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 SPAG5Q96R06 1193 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 ERGIC2Q96RQ1 377 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 RTP3Q9BQQ7 232 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 DDX43Q9NXZ2 648 aaKnown RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 SPG21Q9NZD8 308 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 MSRAQ9UJ68 235 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 COQ4Q9Y3A0 265 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 PCDHB12Q9Y5F1 795 aa8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 PDCD11Q14690 1871 aaKnown RBP8.08□□□□□ -1.12
SF3A3P1-201ENST00000446317 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 TMCO5BA8MYB1 307 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 RIOK3O14730 519 aaKnown RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 PER2O15055 1255 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 ODC1P11926 461 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 ACO1P21399 889 aaKnown RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 RPL9P32969 192 aaKnown RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 KRT9P35527 623 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 GNL1P36915 607 aaPredicted RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 MFAP3P55082 362 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 ERVFC1P60507 584 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 RBM10P98175 930 aaKnown RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 CYP27A1Q02318 531 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 ASIC2Q16515 512 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 MDH1BQ5I0G3 518 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 VARS2Q5ST30 1063 aaKnown RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 SDHAF4Q5VUM1 108 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 KIAA1841Q6NSI8 718 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 LLGL2Q6P1M3 1020 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 PDXDC1Q6P996 788 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 SLC47A2Q86VL8 602 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 PALB2Q86YC2 1186 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 NT5DC4Q86YG4 428 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 LRRC52Q8N7C0 313 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 FBXO22Q8NEZ5 403 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 FEZF2Q8TBJ5 459 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 GPR152Q8TDT2 470 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 POF1BQ8WVV4 589 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 BAP1Q92560 729 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 TIFAQ96CG3 184 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 MRFAP1L1Q96HT8 127 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 HEXIM2Q96MH2 286 aaKnown RBP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 TMEM175Q9BSA9 504 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 MED10Q9BTT4 135 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 SLC28A3Q9HAS3 691 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 ENTPD7Q9NQZ7 604 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 TMLHEQ9NVH6 421 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 PCDHB8Q9UN66 801 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 PCDHA11Q9Y5I1 949 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 TTC3P53804 2025 aa8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 SF3B1O75533 1304 aaKnown RBP eCLIP8.07□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 MYBPHLA2RUH7 354 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 HIDE1A8MVS5 230 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 F8VZ95 297 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 P4HA2O15460 535 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 THAP12O43422 761 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 MFAP3LO75121 409 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 ATICP31939 592 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 BMPR1AP36894 532 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 GPR15P49685 360 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 IFRD2Q12894 506 aaPredicted RBP8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 TBX2Q13207 712 aaPredicted RBP8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 GPM6BQ13491 265 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 CTXN3Q4LDR2 81 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 SLC39A12Q504Y0 691 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 C2CD6Q53TS8 623 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 OVOS1Q6IE37 1185 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 Q7L0L9 218 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 TMC7Q7Z402 723 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 METTL23Q86XA0 190 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 TTC9BQ8N6N2 239 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 UBA3Q8TBC4 463 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 SP7Q8TDD2 431 aaPredicted RBP8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 TFAP2BQ92481 460 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 TCF25Q9BQ70 676 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 ZSWIM1Q9BR11 485 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 APOL5Q9BWW9 433 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 NAA15Q9BXJ9 866 aaKnown RBP8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 PRDM12Q9H4Q4 367 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 CEP72Q9P209 647 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 GTF3C4Q9UKN8 822 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 SLC27A5Q9Y2P5 690 aa8.06□□□□□ -1.12
SF3A3P1-201ENST00000446317 SCN1AP35498 2009 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms