RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TMEM117Q9H0C3 514 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 TMEM245Q9H330 911 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 ATP9BO43861 1147 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 NFIXQ14938 502 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 RBBP7Q16576 425 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 SNX30Q5VWJ9 437 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 TTC39CQ8N584 583 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 PGBD4Q96DM1 585 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 SLC10A4Q96EP9 437 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 ZMYND8Q9ULU4 1186 aaPredicted RBP19.46■□□□□ 0.71
SHANK3-203ENST00000445220 DGKIO75912 1065 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 SLC34A1Q06495 639 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 EFHC2Q5JST6 749 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 P3H2Q8IVL5 708 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 SLC16A10Q8TF71 515 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 BBS2Q9BXC9 721 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 C2orf40Q9H1Z8 148 aa19.46■□□□□ 0.71
SHANK3-203ENST00000445220 HMOX2P30519 316 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 SPRP35270 261 aaPredicted RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 PSMC5P62195 406 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 C6orf10Q5SRN2 563 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 CRAMP1Q96RY5 1269 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 PHKA2P46019 1235 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 STX5Q13190 355 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 USP49Q70CQ1 688 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 TRIM69Q86WT6 500 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 SLC30A5Q8TAD4 765 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 PPRC1Q5VV67 1664 aaKnown RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 E5RI56 91 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 MYO1DO94832 1006 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 SNRNP48Q6IEG0 339 aaKnown RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 IYDQ6PHW0 289 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 APOBEC3FQ8IUX4 373 aaKnown RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 TASP1Q9H6P5 420 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 TOPORSQ9NS56 1045 aaPredicted RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 NSMCE4AQ9NXX6 385 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 EYA4O95677 639 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 GYS1P13807 737 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 TSPY1Q01534 308 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 EPHA7Q15375 998 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 SLC13A5Q86YT5 568 aaPredicted RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 GPD1LQ8N335 351 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 SRBD1Q8N5C6 995 aaKnown RBP19.45■□□□□ 0.7
SHANK3-203ENST00000445220 EGFL8Q99944 293 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 MCM8Q9UJA3 840 aa19.45■□□□□ 0.7
SHANK3-203ENST00000445220 AP5Z1O43299 807 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 PPIDQ08752 370 aaKnown RBP19.44■□□□□ 0.7
SHANK3-203ENST00000445220 IGDCC4Q8TDY8 1250 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 COQ7Q99807 217 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 THRAP10827 490 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 GPC3P51654 580 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 CATSPER4Q7RTX7 472 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 FAM111AQ96PZ2 611 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 GOLPH3Q9H4A6 298 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 PAK5Q9P286 719 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 TAGLN3Q9UI15 199 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 CAPN6Q9Y6Q1 641 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 SETD1BQ9UPS6 1966 aaKnown RBP19.44■□□□□ 0.7
SHANK3-203ENST00000445220 STAT3P40763 770 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 MTDHQ86UE4 582 aaKnown RBP19.44■□□□□ 0.7
SHANK3-203ENST00000445220 TRIM45Q9H8W5 580 aaPredicted RBP19.44■□□□□ 0.7
SHANK3-203ENST00000445220 AKR1B1P15121 316 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 SLC9A1P19634 815 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 AP3M2P53677 418 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 CDK17Q00537 523 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 EFHC1Q5JVL4 640 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 SZRD1Q7Z422 152 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 ZFYVE19Q96K21 471 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 NDEL1Q9GZM8 345 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 CASS4Q9NQ75 786 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 LRFN2Q9ULH4 789 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 PCDHGB4Q9UN71 923 aa19.44■□□□□ 0.7
SHANK3-203ENST00000445220 FAM205CA6NFA0 338 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 EIF2B2P49770 351 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 USP10Q14694 798 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 PLEKHM3Q6ZWE6 761 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 LPCAT2Q7L5N7 544 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 PPIL6Q8IXY8 311 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 RFWD2Q8NHY2 731 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 VPS33BQ9H267 617 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 TUFT1Q9NNX1 390 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 EFCAB14O75071 495 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 PSMA4P25789 261 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 PDAP1Q13442 181 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 RRM2BQ7LG56 351 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 CCDC60Q8IWA6 550 aaPredicted RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 ACTRT1Q8TDG2 376 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 FRMD8Q9BZ67 464 aaPredicted RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 TRIM49D1C9J1S8 452 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 AP1G2O75843 785 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 FAM58BPP0C7Q3 252 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 PIGHQ14442 188 aaPredicted RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 KBTBD12Q3ZCT8 623 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 YTHDF3Q7Z739 585 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 ZFRQ96KR1 1074 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 WRNIP1Q96S55 665 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 TIPINQ9BVW5 301 aa19.43■□□□□ 0.7
SHANK3-203ENST00000445220 SARS2Q9NP81 518 aaKnown RBP19.43■□□□□ 0.7
SHANK3-203ENST00000445220 MPP6Q9NZW5 540 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms