RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 PTENP60484 403 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 CTXN3Q4LDR2 81 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 C6orf132Q5T0Z8 1188 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 CWC27Q6UX04 472 aaKnown RBP15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 RNF19BQ6ZMZ0 732 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 MIER3Q7Z3K6 550 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 FERMT3Q86UX7 667 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 SLC41A1Q8IVJ1 513 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 PGBD3Q8N328 593 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 HMGB4Q8WW32 186 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 GJA10Q969M2 543 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 RILPL2Q969X0 211 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 LENG9Q96B70 501 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 TASP1Q9H6P5 420 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 IL21RQ9HBE5 538 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 H7C4K7 107 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 RECQL4O94761 1208 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 CPB1P15086 417 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 SDSP20132 328 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 TMPRSS3P57727 454 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 MBTD1Q05BQ5 628 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 NFATC3Q12968 1075 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 PLD1Q13393 1074 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 PPP1R18Q6NYC8 613 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 TMPRSS12Q86WS5 348 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 RGL4Q8IZJ4 473 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 IGDCC4Q8TDY8 1250 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 TMEM176AQ96HP8 235 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 HSPA12BQ96MM6 686 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 TEKT3Q9BXF9 490 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 GOLGA2P5Q9HBQ8 144 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 TM7SF3Q9NS93 570 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 MAFFQ9ULX9 164 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 CCL26Q9Y258 94 aa15.66■□□□□ 0.1
SYNCRIP-203ENST00000444272 K7EQS6 105 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 MSH4O15457 936 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 ASAP2O43150 1006 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 CR2P20023 1033 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 EPHB3P54753 998 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 CLDN6P56747 220 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 CYP4A11Q02928 519 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 UPP1Q16831 310 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 GLRA4Q5JXX5 417 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 LRCH2Q5VUJ6 765 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 CC2D1AQ6P1N0 951 aaPredicted RBP15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 SLC36A4Q6YBV0 504 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 RALYLQ86SE5 291 aaKnown RBP15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 CPA6Q8N4T0 437 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 TRIML1Q8N9V2 468 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 LGMNQ99538 433 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 ZDHHC5Q9C0B5 715 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 DHX33Q9H6R0 707 aaKnown RBP15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 ECT2Q9H8V3 914 aa15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 ZNF638Q14966 1978 aaKnown RBP15.65■□□□□ 0.1
SYNCRIP-203ENST00000444272 A0A1B0GUA9 196 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 FLRT2O43155 660 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 JUPP14923 745 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 MRPL58Q14197 206 aaKnown RBP15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 PTPRNQ16849 979 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 RAB11FIP4Q86YS3 637 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 ALLCQ8N6M5 410 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 TXNDC5Q8NBS9 432 aaKnown RBP15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 RDM1Q8NG50 284 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 CEP170P1Q96L14 293 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 RIT2Q99578 217 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 CRISPLD1Q9H336 500 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 FAM124BQ9H5Z6 455 aaPredicted RBP15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 GAREM1Q9H706 876 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 HSPBP1Q9NZL4 362 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 SUSD2Q9UGT4 822 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 BTBD3Q9Y2F9 522 aa15.64■□□□□ 0.09
SYNCRIP-203ENST00000444272 SYN3O14994 580 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 FGF19O95750 216 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 ZNF883P0CG24 379 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 GNSP15586 552 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 HNF1BP35680 557 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 PDE1AP54750 535 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 ANTXR2P58335 489 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 RTP5Q14D33 572 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 PDGFRLQ15198 375 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 ZNF280DQ6N043 979 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 DNAJB7Q7Z6W7 309 aaPredicted RBP15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 RIN3Q8TB24 985 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 TCP11Q8WWU5 503 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 NAF1Q96HR8 494 aaKnown RBP15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 PGLYRP2Q96PD5 576 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 SLC46A2Q9BY10 475 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 FNDC3AQ9Y2H6 1198 aaKnown RBP15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 ITPR2Q14571 2701 aa15.63■□□□□ 0.09
SYNCRIP-203ENST00000444272 TCRBV21S2A2A0A5A6 115 aa15.62■□□□□ 0.09
SYNCRIP-203ENST00000444272 SGK1O00141 431 aa15.62■□□□□ 0.09
SYNCRIP-203ENST00000444272 TNFSF14O43557 240 aa15.62■□□□□ 0.09
SYNCRIP-203ENST00000444272 CILPO75339 1184 aa15.62■□□□□ 0.09
SYNCRIP-203ENST00000444272 VNN2O95498 520 aa15.62■□□□□ 0.09
SYNCRIP-203ENST00000444272 RFC5P40937 340 aa15.62■□□□□ 0.09
SYNCRIP-203ENST00000444272 ALDH1A3P47895 512 aa15.62■□□□□ 0.09
SYNCRIP-203ENST00000444272 SCRN1Q12765 414 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms