RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 BZW2Q9Y6E2 419 aaKnown RBP14.4□□□□□ -0.1
SF1-210ENST00000443908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.4□□□□□ -0.11e-8■□□□□ 11.1
SF1-210ENST00000443908 MICAL3Q7RTP6 2002 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 SSU72P8A0A1W2PR75 194 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 GRXCR2A6NFK2 248 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 SERPING1P05155 500 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 SKILP12757 684 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 ASPAP45381 313 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
SF1-210ENST00000443908 TUSC3Q13454 348 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 TIGD5Q53EQ6 642 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 TCEAL5Q5H9L2 206 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 NOMO2Q5JPE7 1267 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 SCARA3Q6AZY7 606 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 SPOPLQ6IQ16 392 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 FIBCD1Q8N539 461 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 KAT5Q92993 513 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 DDX27Q96GQ7 796 aaKnown RBP14.39□□□□□ -0.11
SF1-210ENST00000443908 C11orf16Q9NQ32 467 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 LRFN2Q9ULH4 789 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
SF1-210ENST00000443908 BRWD1Q9NSI6 2320 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
SF1-210ENST00000443908 FAM163BP0C2L3 166 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 ACO1P21399 889 aaKnown RBP14.38□□□□□ -0.11
SF1-210ENST00000443908 TAF6P49848 677 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 AFF1P51825 1210 aaKnown RBP14.38□□□□□ -0.11
SF1-210ENST00000443908 DSC1Q08554 894 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 ARHGAP44Q17R89 818 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 WDR72Q3MJ13 1102 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 SV2CQ496J9 727 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 HGSNATQ68CP4 663 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 IRF2BP2Q7Z5L9 587 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 CCDC170Q8IYT3 715 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
SF1-210ENST00000443908 ARID3AQ99856 593 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 MRPL9Q9BYD2 267 aaKnown RBP14.38□□□□□ -0.11
SF1-210ENST00000443908 GDAP2Q9NXN4 497 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 CLDND1Q9NY35 253 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 ZKSCAN5Q9Y2L8 839 aa14.38□□□□□ -0.11
SF1-210ENST00000443908 TMEM189-UBE2V1I3L0A0 370 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 PPEF2O14830 753 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 GFPT2O94808 682 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 CSPG5O95196 566 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 FGFR1P11362 822 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
SF1-210ENST00000443908 CTNNB1P35222 781 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 TNNC1P63316 161 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 KLHL30Q0D2K2 578 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 DPH6Q7L8W6 267 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 ABI1Q8IZP0 508 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 PABPC5Q96DU9 382 aaKnown RBP14.37□□□□□ -0.11
SF1-210ENST00000443908 ZNF830Q96NB3 372 aaPredicted RBP14.37□□□□□ -0.11
SF1-210ENST00000443908 NSUN3Q9H649 340 aaKnown RBP14.37□□□□□ -0.11
SF1-210ENST00000443908 IGFLR1Q9H665 355 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 GOLGA2P5Q9HBQ8 144 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 TTC3P53804 2025 aa14.37□□□□□ -0.11
SF1-210ENST00000443908 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 PRR33A8MZF0 331 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 PODXLO00592 558 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 NCK2O43639 380 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 CLSTN1O94985 981 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 POMCP01189 267 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 AARSP49588 968 aaKnown RBP eCLIP14.36□□□□□ -0.11
SF1-210ENST00000443908 ZNF132P52740 706 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 BPIFB4P59827 614 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 LILRA4P59901 499 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 INCA1Q0VD86 236 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 UPP1Q16831 310 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 TDRD12Q587J7 1177 aaKnown RBP14.36□□□□□ -0.11
SF1-210ENST00000443908 LIMS2Q7Z4I7 341 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 TMEM130Q8N3G9 435 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 CASD1Q96PB1 797 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 CHP1Q99653 195 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 NHEJ1Q9H9Q4 299 aaPredicted RBP14.36□□□□□ -0.11
SF1-210ENST00000443908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.114e-8■■■■■ 40.6
SF1-210ENST00000443908 CISHQ9NSE2 258 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 TBC1D13Q9NVG8 400 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 NXF1Q9UBU9 619 aaKnown RBP14.36□□□□□ -0.11
SF1-210ENST00000443908 POLIQ9UNA4 740 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 PTPRSQ13332 1948 aa14.36□□□□□ -0.11
SF1-210ENST00000443908 SOWAHDA6NJG2 315 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 TACC1O75410 805 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
SF1-210ENST00000443908 CYLC1P35663 651 aaPredicted RBP14.35□□□□□ -0.11
SF1-210ENST00000443908 BMPR1AP36894 532 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 CLCNKBP51801 687 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 CLUL1Q15846 466 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
SF1-210ENST00000443908 RAD9BQ6WBX8 426 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 ZSCAN30Q86W11 494 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 ZNF677Q86XU0 584 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 COLGALT2Q8IYK4 626 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 TOP6BLQ8N6T0 577 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 SPATA18Q8TC71 538 aa14.35□□□□□ -0.11
SF1-210ENST00000443908 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms