RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SNX9Q9Y5X1 595 aa13.81□□□□□ -0.2
PDLIM2-212ENST00000443561 TTC28Q96AY4 2481 aa13.81□□□□□ -0.2
PDLIM2-212ENST00000443561 MUC3AQ02505 3323 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 FSD2A1L4K1 749 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 MTMR11A4FU01 709 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 H7C4K7 107 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 IKBKBO14920 756 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 ZMYND10O75800 440 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 ASS1P00966 412 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 ACAT1P24752 427 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 LMO2P25791 158 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 RPL13P26373 211 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 RAP1GAPP47736 663 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 MARSP56192 900 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 NCOA4Q13772 614 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 BMS1Q14692 1282 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 TJAP1Q5JTD0 557 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 TRIM59Q8IWR1 403 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 ADGRF2Q8IZF7 708 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 CMASQ8NFW8 434 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 TSG101Q99816 390 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 ZCWPW1Q9H0M4 648 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 ADAM7Q9H2U9 754 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-212ENST00000443561 N4BP1O75113 896 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 ATP2C2O75185 946 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 MBD3O95983 291 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 C8AP07357 584 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 ATF2P15336 505 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 HOXB8P17481 243 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 PAX3P23760 479 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 PPP1R2P41236 205 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 ASPAP45381 313 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 CDH8P55286 799 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 ARPP19P56211 112 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 NTHL1P78549 312 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 BIRC3Q13489 604 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 STIM1Q13586 685 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 GPR149Q86SP6 731 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 TOP6BLQ8N6T0 577 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 MLKLQ8NB16 471 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 ATAD1Q8NBU5 361 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 HDAC7Q8WUI4 952 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 KHSRPQ92945 711 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 PGLYRP2Q96PD5 576 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 SRRTQ9BXP5 876 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 DNAJC25Q9H1X3 360 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 MMRN2Q9H8L6 949 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 TMEM8AQ9HCN3 771 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 ANAPC1Q9H1A4 1944 aa13.79□□□□□ -0.2
PDLIM2-212ENST00000443561 NCOR1O75376 2440 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 OR6C75A6NL08 312 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 SOAT2O75908 522 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 WARSP23381 471 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 AP3M2P53677 418 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 ZP2Q05996 745 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 ADCY1Q08828 1119 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 GPR17Q13304 367 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 CCDC183Q5T5S1 534 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 SCARA5Q6ZMJ2 495 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 TCEAL8Q8IYN2 117 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 LMO3Q8TAP4 145 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 ADAMTS19Q8TE59 1207 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 RHOBTB2Q9BYZ6 727 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 TMEM30AQ9NV96 361 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 HCFC1R1Q9NWW0 138 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 DSEQ9UL01 958 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 COQ4Q9Y3A0 265 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 INSL5Q9Y5Q6 135 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
PDLIM2-212ENST00000443561 CCDC195A0A1B0GUA6 201 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 BICDL2A1A5D9 508 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 CCL16O15467 120 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 TACC1O75410 805 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 KRT13P13646 458 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 CPB1P15086 417 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 ATF6P18850 670 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 HOXA9P31269 272 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 ATICP31939 592 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms